Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20solani_20[genbank_20GCA_5F002215905.1_202017-07-07] 17 sequences; 45,813,297 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq11 230 3e-55 seq16 84.2 3e-11 seq10 84.2 3e-11 >seq11 Length=4934405 Score = 230 bits (254), Expect = 3e-55 Identities = 963/1494 (64%), Gaps = 47/1494 (3%) Strand=Plus/Minus Query 75146 TACTTTGGTCTCAAAACCCTTGAGAAGAGCTA---TCTTCAACGGCTCGATGGCATCCTC 75202 |||||||| |||| ||||||||| || || || |||| | | ||||||| | Sbjct 3281291 TACTTTGGCTTCAAGACCCTTGAGC-GATCTTACCTCCTCAA--GATTGATGGCAAGATT 3281235 Query 75203 ATGGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATT 75262 | || ||| ||| ||||| ||||||| || || |||||||| || || ||||| Sbjct 3281234 GTTGAGCGCCCCCAGCACATGATCATGCGTGTGGCTGTCGGCATCTGGGGTGACAACATT 3281175 Query 75263 GATTCTGTCTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACAC 75320 || |||| | ||||| ||| || ||||| |||| | | ||| |||||| | | Sbjct 3281174 GAGCGTGTCCTCGAGACTTACAACCTCATGTCGAGCAAGTTCT--TCACTCACGCCTCCC 3281117 Query 75321 CAACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCA 75380 | |||||||||||||| ||||| || || ||| | ||| ||||||||| ||| || Sbjct 3281116 CCACCCTCTTCAATGCGGGTACCCCCCAGCCCCAGCTCTCCTCATGCTTCCTTGTCGACA 3281057 Query 75381 ACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAA 75440 ||||||||| || | ||||| |||| ||||| | | ||||| || || | Sbjct 3281056 TGAAGGAGGACAGTATTGAGGGTATTTATGATACTCTCAAGACTTGTGCCATGATTTCCA 3280997 Query 75441 AGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTC 75500 || |||||| |||||||| || || | || | | |||| | ||| || Sbjct 3280996 AGATGGCTGGTGGTATTGGCCTGAACGTGCACCGAATCCGTGCCACTGGTTCTTACATCG 3280937 Query 75501 GGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAG 75560 || || || ||| || | ||| ||| || ||||| || || || ||| ||| | Sbjct 3280936 CCGGTACCAACGGTACCTCCAACGGTGTTACCCCCATGCTCCGTGTCTTCAACAACACTG 3280877 Query 75561 CGCGCTATGTAAATCAAGCGGGGCGT---CGCAAGGGGTCCATCGCGGTCTACTTGGAAC 75617 | || || || |||| | || | || || || | || ||||| | || | Sbjct 3280876 CCCGATACGTCGATCAGGGTGGCAATAAGCGACCTGGTGCCTTTGCCATCTACCTTGAGC 3280817 Query 75618 CATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGG 75677 | ||||| || ||| || | ||||||||||| | || ||||| || | || |||| Sbjct 3280816 CCTGGCACGCAGATGTCTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGG 3280757 Query 75678 CTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTG 75737 ||| | | || || || | || |||||||| || || ||||||||||| || | Sbjct 3280756 TTCGCGCTCGCGACCTGTTCCTGGCTCTCTGGATTCCCGATCTCTTCATGAAGCGTGTCG 3280697 Query 75738 AGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGG 75797 || || ||| | ||| |||| | ||||| || || || || ||| ||||| Sbjct 3280696 AGAAGAACGGTGACTGGACTCTCATGTGTCCCAACGAGTGTCCCGGCCTCGCCGACTGCT 3280637 Query 75798 TGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTA---GAGCCAATG 75854 ||||||||||| || || || ||| |||||||| ||| |||| | ||| Sbjct 3280636 ACGGTGAGGAGTTCGAGGCTCTGTACGAGAAGTATGAGAAGGCTGGTAAGGGTCGCAA-- 3280579 Query 75855 CGACTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGA 75913 ||| | || | | || | | ||| | || || ||| | | ||||| |||||||| Sbjct 3280578 -GACCAT-GAAGGCCCAGAAGCTCTGGTATGCCATCCTCGAGGCTCAGACTGAGACTGGC 3280521 Query 75914 ACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGA 75973 | || | ||||| ||||||||| || ||| ||||| ||||| ||||| | || Sbjct 3280520 AACCCCTTCATGCTCTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACCTTGGT 3280461 Query 75974 ACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACG 76033 || || ||||| || |||||||| || ||| | |||||| | |||||| Sbjct 3280460 ACCATTCGCAGCTCCAACCTTTGCACCGAGATTATCGAGTACTGTGCCCCTGATGAGGTT 3280401 Query 76034 GCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCA---ATGAAGAGACTCGC 76090 ||||| ||||| | || || |||||||||| | ||| | || ||| | || Sbjct 3280400 GCTGTCTGCAACCTTGCCTCCCTCGCCCTTCCCTCTTTCATCAACTACGACGAGGCCTGC 3280341 Query 76091 ACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGA 76150 | ||| | | || || || || ||||| ||| ||| || || ||| | Sbjct 3280340 ---TATGACTTCCAGAAGCTACACGAGGTCACACAGACTGTCGTTCGCAACCTGAACAGG 3280284 Query 76151 GTCATTGACAGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGACAC 76207 |||| || || || ||||| ||| || ||| | || || ||||||||| Sbjct 3280283 ATCATCGATGTGAACCACTACCCCGTTCCTGAAGCT-CGCAACAG--CAACATGCGACAC 3280227 Query 76208 AGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATT-TTGTGCCGCTACGC 76266 | || |||||| | ||||| || ||||| || |||| || || | || ||| | || Sbjct 3280226 CGGCCCATTGGTGTCGGTGTCCAGGGTCTTGCCGATGCTTTCCTTGCTCTG-CGC-ATGC 3280169 Query 76267 ATTT-GATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACG 76325 ||| || || ||| || ||| |||| | |||||||| ||||| || || | Sbjct 3280168 CTTTCGAGTCTCCTGAGGCTCGAGAGCTGAACAAGCAGATCTTTGAGACCATCTACCATG 3280109 Query 76326 CATCCCTGGAGGCGAGTT--GTG-AATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTG 76382 | |||| || || ||| | | || | | | ||| |||| || || Sbjct 3280108 CTGCCCTCACTGC---TTCCGTGCAGCTCGCCAAGGAGGAGGGTCCCTACTCCACCTTCA 3280052 Query 76383 AGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGC 76442 |||| |||||||| || | || | || ||||| || |||| |||| ||||| || | Sbjct 3280051 AGGGCTCTCCCGCCTCTGAGGGTATTCTCCAGTTCGACATGT-GGAAAGTGAAGCC-CTC 3279994 Query 76443 T--CAACTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAG 76500 | | || |||||||| ||||| ||| | |||||||| | ||| || ||||| Sbjct 3279993 TGACCTCTGGGACTGGGAGTCTCTCAGGGAGCAGGTCAAGGAGCATGGTACCCGCAACAG 3279934 Query 76501 TCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATG 76560 ||| || | || || ||||| || || ||| | || ||| ||||||| || || || Sbjct 3279933 TCTGCTGCTTGCCCCCATGCCCACTGCTAGCACTTCGCAGATCCTGGGTAACAACGAGTG 3279874 Query 76561 CTTTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTT 76614 ||| || || || || | || ||||| | | | | |||||| || ||||| Sbjct 3279873 CTTCGAGCCTTATACCTCCAATATCTATCAGCGTCGTGTCCTCGCTGGCGAGTT 3279820 >seq16 Length=3011660 Score = 84.2 bits (92), Expect = 3e-11 Identities = 187/274 (68%), Gaps = 10/274 (4%) Strand=Plus/Plus Query 175231 GAGATTGTGGATTTTCTCAAGCAACCCGAGAGATATTTTG-GAAGT--GGTGCCAAGATC 175287 ||| ||||| || | ||||| ||||||| | || | |||| |||||||||||| Sbjct 1568847 GAGTTTGTGAGCTTCTTGAAGCAGCCCGAGA---AGTTCGAGAAGCTCGGTGCCAAGATC 1568903 Query 175288 CCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCC 175347 |||||||| || |||| || ||| || |||||||| ||||| || |||||| ||| Sbjct 1568904 CCCCGAGGAGCAATTCTAGCTGGTCCCCCTGGTACGGGTAAGACACTGCTCGCCAAGGCC 1568963 Query 175348 ATCGCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGCCG--CAAACTTTGTGGAGA 175405 | || || || || ||||| ||| | ||||| | || | | | || || |||| Sbjct 1568964 ACGGCTGGCGAGTCTGGAGTCCCCTTC-TTCAGTG-TGAGCGGTTCTGAGTTCGTCGAGA 1569021 Query 175406 TGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCCCGCGAAAATC 175465 ||||||| ||||| ||| | | || || || || || | | | ||| | || Sbjct 1569022 TGTTTGTGGGTGTTGGTCCTTCTCGTGTGCGAGACCTGTTCGCAGAAGGCCGTAAGAACG 1569081 Query 175466 AACCATGTATTGTCTTCATTGATGAGATTGATGC 175499 || || || |||| ||||||||||| ||||| Sbjct 1569082 CTCCTTGCATCATCTTTATTGATGAGATCGATGC 1569115 >seq10 Length=5928648 Score = 84.2 bits (92), Expect = 3e-11 Identities = 147/209 (70%), Gaps = 4/209 (2%) Strand=Plus/Minus Query 65023 AAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAAAGTCTCGCTCCTTCGCCGAGCG 65081 |||||||| | ||||| || |||| | | |||| | ||| ||||| ||| |||| Sbjct 4470866 AAGAAGGCCGACTGGGCCATCCGATGGATCCAGGACAAGGACTCT-TCCTTTGCCCAGCG 4470808 Query 65082 CCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCG-CTATTT 65140 || |||| || || || ||||||||||| ||| ||| | || ||| | || | Sbjct 4470807 TCTCGTTGCCTTCGCTGCCGTCGAGGGTATCTTTTTCAGCGGTGCCTT-TGCTTCCATCT 4470749 Query 65141 ATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCC 65200 ||| | |||||||| ||||||||||| || || |||||| || || | || || | Sbjct 4470748 TCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTGACCTTCTCTAACGAGTTAATATCTC 4470689 Query 65201 GAGATGAGGGTCTCCACCAGGAGTTTGCC 65229 | ||||||||||| ||| || |||||| Sbjct 4470688 GTGATGAGGGTCTTCACACCGACTTTGCC 4470660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569473228960