Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20solani_20[genbank_20GCA_5F002215905.1_202017-07-07] 17 sequences; 45,813,297 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq13 86.0 1e-11 >seq13 Length=4347623 Score = 86.0 bits (94), Expect = 1e-11 Identities = 118/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 171905 AGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTAT 171964 || ||| |||| || | ||| || ||||| || || | || |||||||||||| || || Sbjct 2711959 AGTTCGGCCGTCCTCGAGTTGCTTGCCAGCGAAGATAAGTCGCTGTTGGTCAGGAGGAAT 2711900 Query 171965 TCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTC 172024 |||||| ||||| || || || || || ||| || || || || ||||| || || Sbjct 2711899 TCCTTCCTTATCCTGAATCTTCGACTTCACGTTATCGATCGTGTCGGATGATTCCACCTC 2711840 Query 172025 TAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || ||||| || ||||| | || || | ||| || ||||| Sbjct 2711839 AAGGGTGATGGTCTTTCCAGTGAGAGTCTTGACGAAGATTTGCAT 2711795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905135807658600