Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20solani_20[genbank_20GCA_5F002215905.1_202017-07-07] 17 sequences; 45,813,297 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq10 125 2e-23 seq1 118 3e-21 seq11 109 2e-18 seq14 102 2e-16 >seq10 Length=5928648 Score = 125 bits (138), Expect = 2e-23 Identities = 244/355 (69%), Gaps = 4/355 (1%) Strand=Plus/Minus Query 133305 CCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACAT 133364 |||| || || ||| || || | ||||| |||||| || ||||| || || | Sbjct 4471012 CCGAGGCTCGATGCTTCTACGGTTTCCAGATCATGATGGAGAACATCCACTCCGAGACCT 4470953 Query 133365 ATTCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAGCACAAACTATTCAACG 133424 | || || ||||| || || ||||| || | |||| | | || ||||||| Sbjct 4470952 ACTCCCTGCTCATTGACACCTATATCAAGGAGCCTTCCCAGCGAACCTACCTCTTCAACG 4470893 Query 133425 CCATTAGCGAATTTCC-TTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAG 133483 ||||| | || ||| ||| || ||||| | |||||||| || |||||||||| Sbjct 4470892 CCATT-GAGACCATCCCTTGCATCCGCAAGAAGGCCGACTGGGCCATCCGATGGATCCAG 4470834 Query 133484 GACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAttttt 133543 |||||| | ||||| ||||||||||| || |||| || ||||| || ||| Sbjct 4470833 GACAAGGACTCTTCCTTTGCCCAGCGTCTCGTTGCCTTCGCTGCCGTCGAGGGTATCTTT 4470774 Query 133544 ttCAGTGGTGCGTTCTGCT-CTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACT 133602 ||||| ||||| || |||| | || || ||||| || ||||||||| | | || || || Sbjct 4470773 TTCAGCGGTGCCTT-TGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCT 4470715 Query 133603 GTGTTTTTCTAACGAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCC 133657 | || |||||||| | || || | || |||| ||||||||||| |||||| Sbjct 4470714 GACCTTCTCTAACGAGTTAATATCTCGTGATGAGGGTCTTCACACCGACTTTGCC 4470660 >seq1 Length=6466812 Score = 118 bits (130), Expect = 3e-21 Identities = 190/273 (70%), Gaps = 0/273 (0%) Strand=Plus/Minus Query 302571 GTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGC 302630 |||||||| | ||||| | || |||||||||||||| || | || || || || Sbjct 1878966 GTCTTCCAGAGCCTTGACCAGTCGTCGCTGAATATAACCTGTCTCGGCAGTCTTGACTGC 1878907 Query 302631 TGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAG 302690 |||||||| ||||| | |||||| |||| || |||||||| | ||| || || Sbjct 1878906 AGTATCAATGAGACCTTCTCGACCAGCCATGGCGTGGAAGAAAAACTCGGAAGGAGTCAG 1878847 Query 302691 CCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGT 302750 || | || | ||| |||| ||||||||||| || |||||||| | || |||||| Sbjct 1878846 ACCACGAAGGTACGAGTTCTCGACGAAACCACGAGCTTCGGGCGAGTAATCATCCTTGGT 1878787 Query 302751 AAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTG 302810 || || ||||| || | | || | || | || ||||||||||| || || |||| Sbjct 1878786 GAAATGGGGCAGTGTGCGATACTTGAATCCAAAGGGAATACGCTTTCCTTCGACAATCTG 1878727 Query 302811 CTGTCCCAGGCACGAAATCATCTGCGAAATATT 302843 ||| |||| || | ||||||| || || || Sbjct 1878726 CTGACCCACAAGCGCAGTCATCTGTGAGATGTT 1878694 Score = 114 bits (126), Expect = 4e-20 Identities = 139/188 (74%), Gaps = 1/188 (1%) Strand=Plus/Minus Query 251475 GAAGC-GAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGAC 251533 ||||| |||| || |||| | |||| ||||||||||||||||||||| | ||| |||| Sbjct 2271727 GAAGCTGAGAGGCGCCGTAGGCGATCAGACAATCACGCTCCATTTCACCCAGACGCAGAC 2271668 Query 251534 CACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGG 251593 |||| || || | | ||| |||| |||||||| || || | || | ||||| ||| Sbjct 2271667 CACCTTCTCGGGAACGACCTTCGGTGGGCTGACGTGTCAGGATGGCCTTGGGACCTCTGG 2271608 Query 251594 AGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGA 251653 | || ||| ||| || | ||||| ||||| || ||||||||| | ||||||| Sbjct 2271607 ATCGAGAATGCATCTTGTCTTGAACCATGTGCTTCAGGCGCTGGTAGTAGATGGGACCGT 2271548 Query 251654 TGAAGATG 251661 |||||||| Sbjct 2271547 TGAAGATG 2271540 Score = 89.7 bits (98), Expect = 2e-12 Identities = 104/140 (74%), Gaps = 3/140 (2%) Strand=Plus/Minus Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872 |||||||| | | |||||| ||||| | || ||||| |||||| | |||||||| Sbjct 1879742 AGAATTTCCTTGAGACGGGGCACACCCAGAGTGACGTT---CTTGGAAGACACACCAGCG 1879686 Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932 || ||||| || ||||| || | ||||||| |||||||||||| || || || | Sbjct 1879685 AAATGGAATGTGTTCAGTGTCATCTGAGTAGCAGGCTCACCAATAGACTGAGCAGCCAAA 1879626 Query 301933 ATACCAACCATTTCTCCTGG 301952 | |||||||||||| || || Sbjct 1879625 ACACCAACCATTTCACCAGG 1879606 >seq11 Length=4934405 Score = 109 bits (120), Expect = 2e-18 Identities = 407/633 (64%), Gaps = 19/633 (3%) Strand=Plus/Plus Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689 ||| || | |||||| ||| ||||| || || ||||| || | ||||||||||| Sbjct 3280419 GTACTCGATAATCTCGGTGCAAAGGTTGGAGCTGCGAATGGTACCAAGGTTCTTCTGGTT 3280478 Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749 || | ||| || ||||||||| || ||| | ||| | || ||||| |||| || Sbjct 3280479 GCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTGCCAGTCTCAGTCTGAGC 3280538 Query 155750 GTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTG----TATCTGCCTT 155805 || || || |||||| | |||| || || |||| || | ||||| Sbjct 3280539 CTCGAGGATGGCATACCAGAGCTTCTGGGCCTTCATGGTCTTGCGACCCTTACCAGCCTT 3280598 Query 155806 CCGACTCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAG 155865 | ||||| ||| ||||| | | | ||||||||||| || || || || | Sbjct 3280599 C----TCATACTTCTCGTACAGAGCCTCGAACTCCTCACCGTAGCAGTCGGCGAGGCCGG 3280654 Query 155866 GGCACTTATCGGGGCAAAACAGCGACCA---AATTTTATTACCGATTACACGCTCCATAA 155922 | |||| | ||| || | || | ||| | || || ||| |||||| ||| | Sbjct 3280655 GACACTCGTTGGGACACATGAGAGTCCAGTCACCGTTCTTCTCGA---CACGCTTCATGA 3280711 Query 155923 ATACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGT 155982 | | ||| ||| | ||| ||| ||||| | || |||||| | ||||| Sbjct 3280712 AGAGATCGGGAATCCAGAGAGCCAGGAACAGGTCGCGAGCGCGAACCTCCTCCTTGCCGT 3280771 Query 155983 GATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAG 156042 | ||||| || || || | ||| || | ||| | || ||||| || || || | Sbjct 3280772 GGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGG 3280831 Query 156043 CAAAACTACCATTCCTCTT---GCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGA 156099 |||| |||| | ||| |||||||||||| || || || ||||| || ||||||| Sbjct 3280832 CAAAGGCACCAGGTCGCTTATTGCCACCCTGATCGACGTATCGGGCAGTGTTGTTGAAGA 3280891 Query 156100 CACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAG 156159 ||| ||||| || ||| ||| ||||| || || ||||| ||| || | ||||||| Sbjct 3280892 CACGGAGCATGGGGGTAACACCGTTGGAGGTACCGTTGGTACCGGCGATGTAAGAACCAG 3280951 Query 156160 ATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCAT-TTAGAAATTTGAGCG 156218 | || | || | | || ||||||||||| | |||| || ||||| || Sbjct 3280952 TGGCACGGATTCGGTGCACGTTCAGGCCAATACCACCAG-CCATCTTGGAAATCATGGCA 3281010 Query 156219 CATTCCTTTACAGTATTGAAAATACCTTCAATA 156251 || ||| | ||||| ||||||| |||||| Sbjct 3281011 CAAGTCTTGAGAGTATCATAAATACCCTCAATA 3281043 >seq14 Length=3440514 Score = 102 bits (112), Expect = 2e-16 Identities = 378/576 (66%), Gaps = 26/576 (5%) Strand=Plus/Minus Query 251425 CACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTGGTGAA-GCGAGA 251483 || || ||||| | | | ||||| || | ||| | || || |||| ||| ||| | Sbjct 503022 CAGACGTGGACTCGGAAGGCATCCGAAACTTCAAACAGACGCTCCTTCAGGAAAGCG-GC 502964 Query 251484 TGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCG 251543 ||||||||| | ||||||||||||||| ||||| || ||||| || ||||||||||| || Sbjct 502963 TGCACCGTGGGCAATCATACAATCACGTTCCATCTCTCCGAATCGGAGACCACCATCTCG 502904 Query 251544 AGCCCTACCCTCGGCAGGCTGACGAGTGA-GAT-TAACCATAGGACCGATGGAGCGGCTA 251601 || | ||| ||| | ||||| ||||| | ||| | | | ||||| | ||| Sbjct 502903 GGCACGACCTTCGACGGGCTGTCGAGTCATGATCTGA--ACGGGACCACGAGCTCGGGCG 502846 Query 251602 TGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGA-- 251659 || ||| || | |||||| || || ||||| ||| | | || |||| ||| | Sbjct 502845 TGGATCTTGTCGTCTACCATGTGACGAAGTCGCTGATAGTAGGTAGGTCCGAAGAACACC 502786 Query 251660 --TGCTCGAAGGCATTTGCTCTCCAGTTAGAGCGTTATACATAACTTCGTTTCCATTAGA 251717 ||||||||| |||| |||||| | |||| ||||||| ||| || ||| Sbjct 502785 TGTGCTCGAAG---CTTGC-GTCCAGTATGGCCGTTGTACATAATCTCGAAACCTCGAGA 502730 Query 251718 TTCATAACCAAG-TTTC--TGTAGCTCTGAAGCAATATCACCAATCTTGAATTTGCTAAA 251774 | || || | |||| | ||||| ||| | || || ||| | | || Sbjct 502729 CTGGTAGCCGTGCTTTCGGAGCAGCTCCGAAACGGAGTCGACA---GTGACGTCTGTGAA 502673 Query 251775 ACTGGTGCCGTCTCCGTAAAGACCCATTTGA--ATCAACACTTTGCCTAAAAGTGTCTCT 251832 | ||| | || || | | || || || | |||| || | | || || Sbjct 502672 AGGTGTGGCATCACCCTCCATGCC--TTCGAGCGTTGACACCTTACTGAGGAGGCATTCA 502615 Query 251833 TTCAGTTGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGT 251892 ||| ||||| || ||||| || ||||| |||||||| || ||||||||||| ||| Sbjct 502614 ATCAAATGGGCAATTGTCATTCGCGACGGAATGGCATGGGGGTTAATGATGATGTCTGGT 502555 Query 251893 TTCAGTCCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATA-ATGTTTCCAATAGTTCC 251951 ||| || || | ||||||||||||| | || || | ||||| || || Sbjct 502554 GTCACACCCTCCCTGCTAAAGGGCATATCCTCCT-GTCGGTAGGTAACACCAATGGTACC 502496 Query 251952 CTTTTGTCCGTGACGAGAACTGAACTTATCACCAAT 251987 ||| |||||||||||||| |||||| |||||||| Sbjct 502495 CTTCTGTCCGTGACGAGAGGCGAACTTGTCACCAAT 502460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471817279419729