Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20solani_20[genbank_20GCA_5F002215905.1_202017-07-07] 17 sequences; 45,813,297 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq11 251 7e-62 seq12 136 4e-27 seq13 127 2e-24 seq17 107 2e-18 >seq11 Length=4934405 Score = 251 bits (278), Expect = 7e-62 Identities = 996/1545 (64%), Gaps = 53/1545 (3%) Strand=Plus/Plus Query 148260 TTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGATACACGTTGCTCGTAAACGGT 148319 || || ||||| |||||||| ||||| || || ||| |||| | ||| ||| | || Sbjct 3279808 TTAACGACCTGGAACTCGCCAGCGAGGACACGACGCTGATAGATATTGGAGGTATAAGGC 3279867 Query 148320 TCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCATGTACGCTACC 148379 || || |||||||||| |||| ||||||| || | || ||||||||| || | | Sbjct 3279868 TCGAAGCACTCGTTGTTACCCAGGATCTGCGAAGTGCTAGCAGTGGGCATGGGGGCAAGC 3279927 Query 148380 AGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAGCCGCCCAGTCCCAG 148439 ||||| |||||| ||| | | || | | | | |||| | ||||||||||| Sbjct 3279928 AGCAGACTGTTGCGGGTACCATGCTCCTTGACCTGCTCCCTGAGAGACTCCCAGTCCCAG 3279987 Query 148440 AGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCGCGGCTAGCGGGGCTG 148499 || || || |||| |||||||||||| |||| ||||| || ||||| | Sbjct 3279988 AGGTCAGAGGGCTTCACTTTCCACATGTCGAACTGGAGAATACCCTCAGAGGCGGGAGAG 3280047 Query 148500 CCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCA-GCTCGCCTCGAGCGC 148558 |||| | | | | ||| || || | | || || || | ||| | || ||| || Sbjct 3280048 CCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGCGAGCT-GCACGGAAGCAGTGAGGGC 3280106 Query 148559 GCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGC---AGCGCCGC-CGACTCGCTTT 148614 | | ||| || ||||| || ||| |||| ||| | ||| | || | | Sbjct 3280107 AGCATGGTAGATGGTCTCAAAGATCTGCTTGTTCAGCTCTCGAGCCTCAGGAGAC----T 3280162 Query 148615 CGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCCAATGG 148674 || | ||||| ||||| | || || |||||||| ||||| || || || ||||||| Sbjct 3280163 CGAAAGGCATGCGCAGAGCAAGGAAAGCATCGGCAAGACCCTGGACACCGACACCAATGG 3280222 Query 148675 GCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGC-GGATAGTGGTTGCGGTCGATG 148733 |||||||| |||||| | ||| || || || | || |||||||| |||||| Sbjct 3280223 GCCGGTGTCGCATGTTGCTGTTGCGAGC-TTCAGGAACGGGGTAGTGGTTCACATCGATG 3280281 Query 148734 ATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGC------AATTCAAAA 148787 ||| ||| || ||||| || || || ||| | | | ||| || ||| | Sbjct 3280282 ATCCTGTTCAGGTTGCGAACGACAGTCTGTGTGACCTCGTGTAGCTTCTGGAAGTCATAG 3280341 Query 148788 TCGTACTTGTCATCTACGATGCATCGGTTCACGGCGATAGAGGCTAGATTGCACACGGCC 148847 | || ||| | |||| | | | ||||| ||||| || ||||| || || Sbjct 3280342 CAGGCCTCGTCGTAGTTGATGAAAGAGGGAAGGGCGAGGGAGGCAAGGTTGCAGACAGCA 3280401 Query 148848 GTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATT---GCTGCATTTGATC 148904 |||||| ||||| | |||||| | ||||||| ||| || || ||||| || | Sbjct 3280402 ACCTCATCAGGGGCACAGTACTCGATAATCTCGGTGCAAAGGTTGGAGCTGCGAATGGT- 3280460 Query 148905 ACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGT 148964 || | |||||| || |||||||||| |||||| |||||||| |||||| | || Sbjct 3280461 --ACCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGG 3280518 Query 148965 CCGCCAGTTTCCACCTGCGTTTCCACTATG--AACCGATGCAGGTCCTGCGCGCGCACTT 149022 |||||| || ||| | || | ||| | | | || | ||| || ||| Sbjct 3280519 TTGCCAGTCTCAGTCTGAGCCTCGAGGATGGCATACCA--GAGCTTCTGGGC-----CTT 3280571 Query 149023 GCTGCTCGTAGCGACCCT------CCTGCTCGTA--TAAAGTATACAGCCGCTCGAACGC 149074 || || | |||||||| ||| ||| || | ||| | ||| ||||||| | Sbjct 3280572 CATGGTC-TTGCGACCCTTACCAGCCTTCTCATACTTCTCGTACAGAGC--CTCGAACTC 3280628 Query 149075 CTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAGCGACCACACGCC 149134 ||| |||||||| ||| |||| ||||| |||| || || |||||||| | ||| | || Sbjct 3280629 CTCACCGTAGCAGTCGGCGAGGCCGGGACACTCGTTGGGACACATGAGAGTCCAGTCACC 3280688 Query 149135 GTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTACATGAGGTCGCG 149194 || | | || |||||||| || |||||||| | |||||| || | |||||||| Sbjct 3280689 GTTCTTCTCGACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCCAGGAACAGGTCGCG 3280748 Query 149195 CGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCACGCTGAATATGTCCGC 149254 || || || ||| ||| |||||||| || | || | || || Sbjct 3280749 AGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCTGC 3280808 Query 149255 GTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGC---TTGCCGCCCTGGTCGAC 149311 |||||| ||||||| ||| | || | || || ||| ||||| ||||| ||||| Sbjct 3280809 GTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCAGGTCGCTTATTGCCACCCTGATCGAC 3280868 Query 149312 GTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCACTGGCAGTGCCGTT 149371 || || | ||||||| || || || | ||| || || || ||| || ||||| Sbjct 3280869 GTATCGGGCAGTGTTGTTGAAGACACGGAGCATGGGGGTAACACCGTTGGAGGTACCGTT 3280928 Query 149372 AGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTTGACGCCGATGCCGCC 149431 ||| | ||| | || || || | | ||||||||| | ||| || || || Sbjct 3280929 GGTACCGGCGATGTAAGAACCAGTGGCACGGATTCGGTGCACGTTCAGGCCAATACCACC 3280988 Query 149432 -GCCGTACTTTGAGATGGCCGCGC-AGTCGCCGAGCGTCGAGTAGATGCCCTCGATGCTG 149489 ||| | ||| || || || | |||| ||| || || || ||||| || ||| Sbjct 3280989 AGCCAT-CTTGGAAATCATGGCACAAGTC-TTGAGAGTATCATAAATACCCTCAATACTG 3281046 Query 149490 TCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAACGCGTGCCGGCCGCG 149549 || ||||||| | || ||||| ||| | | || || | || || || | Sbjct 3281047 TCCTCCTTCATGTCGACAAGGAAGCATGAGGAGAGCTGGGGCTGGGGGGTACCCGCATTG 3281106 Query 149550 AACATGGTGGGGCTGGCGTGTGT-AAAATATTTCTGGCTCATCATCTCGTACGACTCGAG 149608 || | ||||||| |||||| || || | || || | ||| | | ||| | |||||| Sbjct 3281107 AAGAGGGTGGGGGAGGCGTGAGTGAAGAACTTGCTCG-ACATGAGGTTGTAAGTCTCGAG 3281165 Query 149609 CACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCATCAGCATATGCTGCGG 149668 || || || |||| || || |||||| | || || ||||| | ||| ||||| || Sbjct 3281166 GACACGCTCAATGTTGTCACCCCAGATGCCGACAGCCACACGCATGATCATGTGCTGGGG 3281225 Query 149669 TCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCGTTTTCTAGTGTCTTGTAGCC 149728 ||||| | | ||| |||| ||||| | ||| || || |||||| |||| Sbjct 3281226 GCGCTCAACAATCTTGCCATCAATCTTGAGGAGGTAAGATCGCTCAAGGGTCTTGAAGCC 3281285 Query 149729 AAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGCGGCGTC 149773 |||||| | ||| | ||||| ||| | | | ||||||||| ||| Sbjct 3281286 AAAGTATTGGTATTGGAAGTCACGGTCATAGACAATGGCGGAGTC 3281330 >seq12 Length=8749402 Score = 136 bits (150), Expect = 4e-27 Identities = 151/199 (76%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 |||| ||| ||||| || ||||| |||| || ||| | | | |||||||||||||||| Sbjct 4927405 GGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA-TCCTCGAGCTGCTTGC 4927347 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | ||||| |||||||||||||| |||||||| |||||||| |||||| || Sbjct 4927346 CAGCAAAGATGAGTCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACT 4927287 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | || | ||||||| | |||||| || | ||||| ||| || || || || | Sbjct 4927286 TGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATGGTCTTCCCCGTAAGGG 4927227 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| |||||||| Sbjct 4927226 TCTTGACGAAGATCTGCAT 4927208 >seq13 Length=4347623 Score = 127 bits (140), Expect = 2e-24 Identities = 143/189 (76%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| ||| | | ||| | | | ||||| |||||||||| Sbjct 2711764 GGTGGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTGCGGCCA-TCCTCAAGCTGCTTGC 2711706 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || || |||||||| || ||||| ||||| |||||||| ||||||| || Sbjct 2711705 CAGCAAAGATCAGGCGCTGCTGATCAGGAGGAATGCCCTCCTTGTCCTGGATCTTTGACT 2711646 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | || | |||||||| | |||||| |||| ||||| || ||||| ||||| | Sbjct 2711645 TGACGTTGTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTGCCAGTCAGGG 2711586 Query 133642 TTTTTACGA 133650 | || |||| Sbjct 2711585 TCTTGACGA 2711577 Score = 116 bits (128), Expect = 4e-21 Identities = 133/176 (76%), Gaps = 2/176 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| ||||| |||||||||||| | ||| | | | ||||| ||||||||||| Sbjct 2711485 GTGGACTCCTTCTGGATATTGTAATCGGAAAGGGTGCGGCCA-TCCTCAAGCTGCTTGCC 2711427 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| |||| || |||||||| || ||||||||||| |||||||| ||||| ||| Sbjct 2711426 GGCGAAAATCAGGCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGAATCTTCGACTT 2711367 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCA 133638 || | || | || || | || ||| || |||| ||||| ||| ||||| |||| Sbjct 2711366 GACATTGTCGATGGTATCAGAGGACTCAACCTCGAGGGTGATGGTCTTGCCCGTCA 2711311 Score = 91.5 bits (100), Expect = 1e-13 Identities = 141/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| || || ||||| || ||||| || | ||| ||| | ||||| |||||||| | Sbjct 2712220 GGTCGATTCCTTCTGAATGTTGTAGTCAGAGAGGGTGCGACCA-TCCTCCAGCTGCTTAC 2712162 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || || |||||||||||||| ||||| || |||||||| ||||| || Sbjct 2712161 CAGCAAAGATAAGTCGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGAATCTTGGACT 2712102 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | |||| || ||| ||| ||| || || | |||| || || || || |||| Sbjct 2712101 TCACATTATCAATAGTATCGCTGGACTCGACCTCCAGAGTGATTGTCTTTCCAGTGAGAG 2712042 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || || || |||||||| Sbjct 2712041 TCTTGACAAAGATCTGCAT 2712023 Score = 89.7 bits (98), Expect = 5e-13 Identities = 103/136 (76%), Gaps = 2/136 (1%) Strand=Plus/Minus Query 116476 GGCTTCCACGTGCACGAGTTTGGCGACACCAGCAACGGCTGCACCTCCGCCGGCGAACAC 116535 ||||||||| | ||| || || |||| || ||||||||||||||| |||||| ||| Sbjct 2196249 GGCTTCCACATCCACACTTTCGGTGACAACACCAACGGCTGCACCTCTGCCGGCCCTCAC 2196190 Query 116536 TTCAACCC-CACCGGCCAGGACCACGGCGCGCCCAACGCCGCCGTTCGTCACGTCGGTGA 116594 |||||||| |||| | || |||||| || |||| || || | || ||||| || || Sbjct 2196189 TTCAACCCTCACCAG-AAGACCCACGGTGCTCCCACCGACGAGGCCCGCCACGTTGGCGA 2196131 Query 116595 CCTGGGCAACATTGAG 116610 || |||||||| ||| Sbjct 2196130 TCTCGGCAACATCGAG 2196115 >seq17 Length=2611553 Score = 107 bits (118), Expect = 2e-18 Identities = 112/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||| ||||||||||| ||| | || || |||||||| || || || ||||| |||||| Sbjct 1259156 TCCTCAAGCTGCTTGCCAGCGAAGATCAGTCGCTGCTGATCCGGGGGAATGCCCTCCTTG 1259215 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | |||| ||||| | || ||| || |||| ||||| | Sbjct 1259216 TCCTGGATCTTGGACTTGACATTGTCAATGGTGTCCGAGGACTCGACCTCGAGGGTGATG 1259275 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAA 133652 || ||||| ||||| || || |||||| Sbjct 1259276 GTCTTGCCCGTCAGGGTCTTCACGAAA 1259302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420697273080