Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20solani_20[genbank_20GCA_5F002215905.1_202017-07-07] 17 sequences; 45,813,297 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq10 201 2e-45 >seq10 Length=5928648 Score = 201 bits (222), Expect = 2e-45 Identities = 363/515 (70%), Gaps = 28/515 (5%) Strand=Plus/Minus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| | |||||| || |||||||||||||| || ||||| || |||||| | || | Sbjct 4471215 GATCTGGCAGATGTAC-AAGAAGGCCGAGGCCTCTTTCTGGACTGCGGAGGAGATTGATC 4471157 Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTC 1455887 | | || |||| ||||| ||| ||| | |||||||| ||| Sbjct 4471156 TGTCCAAGGATCTCCACG----ACTGGAACAACCGCCTGACCTCCGACGAGCAGTTCTTC 4471101 Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947 ||| ||| | || ||||| ||| |||||| || |||||||| ||||||||| | Sbjct 4471100 ATCTCTCACATTCTTGCCTTCTTT-GCCGCCTCTGACGGCATCGTCAACGAGAACCTTGT 4471042 Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007 | || || | |||||||| | || ||||| || | || ||||| |||||||| Sbjct 4471041 TGAGCGATTCAGCGGCGAGGTCCAGATCCCCGAGGCTCGATGCTTCTACGGTTTCCAGAT 4470982 Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067 | || || ||||||||||| || |||||||| || || || |||||||| ||||||| Sbjct 4470981 CATGATGGAGAACATCCACTCCGAGACCTACTCCCTGCTCATTGACACCTATATCAAGGA 4470922 Query 1456068 CCCGGTCGAGAAGGACC-ACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAA 1456126 || | || | ||| ||||||| |||||| || || | || | | | || | Sbjct 4470921 GCCTTCCCAGC-GAACCTACCTCTTCAACGCCATTGAGACCATCCCTTGCATCCGCAAGA 4470863 Query 1456127 AGGCCGACTGGGCGATGAAGTGGATC---AACAAGGAGGGCCTCGACACTTTGCCGAGCG 1456183 ||||||||||||| || |||||| ||||||| ||| | ||||||| |||| Sbjct 4470862 AGGCCGACTGGGCCATCCGATGGATCCAGGACAAGGA----CTCTTC-CTTTGCCCAGCG 4470808 Query 1456184 GCTCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTC-TCGG-GCAGTTTCTGCGCCATC 1456240 ||||| | ||| || | ||||||||| ||||||||| ||| || || || ||||| Sbjct 4470807 TCTCGTTGCCTTCGCTGCCGTCGAGGGTATCTTTTTCAGCGGTGCCTTTGCT--TCCATC 4470750 Query 1456241 TTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 || |||||||||||||| || |||||||||||||| Sbjct 4470749 TTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCT 4470715 Score = 89.7 bits (98), Expect = 7e-12 Identities = 174/252 (69%), Gaps = 4/252 (2%) Strand=Plus/Minus Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582 |||||| || |||||| || ||| | ||||| | | ||| | || || || Sbjct 4470605 ATCATCACTGATGCCGTCACCATTGAGCAGGAGTTCCTGACTGAGGCTCTCCCCTGCGCC 4470546 Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642 || |||||||||||||| |||||| |||||||| || || ||||| ||||| | Sbjct 4470545 CTTCTCGGCATGAACGCCGAT-CTCATGAAGCAGTACATCGAGTTC-GTCGCTGACCGTC 4470488 Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702 | || | || |||||| || ||||| |||| | | |||||||| ||| | ||| Sbjct 4470487 TTCTGGTCGCCCTCGGCAACG-AGAAGGTCTACAAGTCCGCCAACCCCTTCGACTTCATG 4470429 Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACGCC 1456761 ||| ||||| || | |||||||||||||| |||||| || || || || ||| Sbjct 4470428 GAGAACATCTCTCTGGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCAG 4470369 Query 1456762 AAGGCCGGCGTC 1456773 ||||| || ||| Sbjct 4470368 AAGGCTGGTGTC 4470357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177809560318754