Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20solani_20[genbank_20GCA_5F002215905.1_202017-07-07] 17 sequences; 45,813,297 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq13 129 6e-25 seq12 118 1e-21 >seq13 Length=4347623 Score = 129 bits (142), Expect = 6e-25 Identities = 148/199 (74%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 |||||||| || ||||| ||||| ||||||||||||||| | | |||| | || || Sbjct 2711775 ACGAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCA 2711716 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| ||||| ||||| |||| ||||||||||| || || ||||| || || || || Sbjct 2711715 AGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGATCAGGAGGAATGCCCTCCTTGTCCTGG 2711656 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || ||| ||||| ||| | |||||||| || ||||| ||||| || || || || Sbjct 2711655 ATCTTTGACTTGACGTTGTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTG 2711596 Query 134685 CCGGTTAAAGTTTTAACGA 134703 || || | || || |||| Sbjct 2711595 CCAGTCAGGGTCTTGACGA 2711577 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || ||||| || || || ||||| || ||||||||||||| | || | ||| ||| Sbjct 2712003 ACCAGGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTGAGAGTTCGGCCGTCCTCG 2711944 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 || || ||||| || || || | ||||| || || || || || ||||| || || ||| Sbjct 2711943 AGTTGCTTGCCAGCGAAGATAAGTCGCTGTTGGTCAGGAGGAATTCCTTCCTTATCCTGA 2711884 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || || || || | |||||||| |||||||| || || || ||||| || Sbjct 2711883 ATCTTCGACTTCACGTTATCGATCGTGTCGGATGATTCCACCTCAAGGGTGATGGTCTTT 2711824 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | ||| || ||||| |||||||| Sbjct 2711823 CCAGTGAGAGTCTTGACGAAGATTTGCAT 2711795 Score = 100 bits (110), Expect = 3e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||||| || || ||||| ||||| || || ||||| ||| | Sbjct 2711515 CCACCACGGAGACGGAGGACGAGATGGAGAGTGGACTCCTTCTGGATATTGTAATCGGAA 2711456 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || ||||| ||||| || ||||||| ||||||||||| || || Sbjct 2711455 AGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGATCAGGAGGG 2711396 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || ||||| || ||||| ||| | || || || || || || Sbjct 2711395 ATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCGATGGTATCAGAGGACTCAACC 2711336 Query 134667 TCGAGAGTAATGGTTTTACCGGT 134689 ||||| || ||||| || || || Sbjct 2711335 TCGAGGGTGATGGTCTTGCCCGT 2711313 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||| ||||| || || |||||||| |||||||||||||| Sbjct 2712249 CCGCCACGGAGACGGAGCACAAGGTGCAGGGTCGATTCCTTCTGAATGTTGTAGTCAGAG 2712190 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| || || || ||||| || || ||||| || | |||||||| ||||| || Sbjct 2712189 AGGGTGCGACCATCCTCCAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCGGGGGGG 2712130 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || ||||| || || || || | || ||| || || || Sbjct 2712129 ATACCCTCCTTGTCCTGAATCTTGGACTTCACATTATCAATAGTATCGCTGGACTCGACC 2712070 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || ||||| || || || || || | ||| || || || || ||||| Sbjct 2712069 TCCAGAGTGATTGTCTTTCCAGTGAGAGTCTTGACAAAGATCTGCAT 2712023 >seq12 Length=8749402 Score = 118 bits (130), Expect = 1e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || ||||| || ||| ||||| || ||||||||||||| | |||| | || ||| Sbjct 4927416 ACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCG 4927357 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| ||||| ||||| || | |||||||| ||||| || ||||| || || || || Sbjct 4927356 AGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGG 4927297 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||||| ||| | |||||||| || ||||| || || || ||||| || Sbjct 4927296 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATGGTCTTC 4927237 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 || || | || || ||||| || ||||| ||| Sbjct 4927236 CCCGTAAGGGTCTTGACGAAGATCTGCATCTTG 4927204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505398292602840