Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20solani_20[genbank_20GCA_5F002215905.1_202017-07-07] 17 sequences; 45,813,297 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq11 120 4e-22 seq10 114 2e-20 >seq11 Length=4934405 Score = 120 bits (132), Expect = 4e-22 Identities = 441/683 (65%), Gaps = 12/683 (2%) Strand=Plus/Plus Query 69352 ATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAAC 69411 || || || || || | ||| || ||||| ||| ||| |||||||| || || || Sbjct 3280456 ATGGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAG 3280515 Query 69412 GGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATT 69471 || | ||||| ||| |||||| |||| || | | ||| | | || || || Sbjct 3280516 GGGTTGCCAGTCTCAGTCTGAGCCTCGAGGATGGCATACCAGAGCTTCTGGGCCTTCAT- 3280574 Query 69472 ACGGTCTTGTAACGCTTCTCT---TTTTCATA-TTGT-GTATATAGCCGTTCGAATTCAT 69526 ||||||| || ||| | || ||||| || | ||| | |||| ||||| || | Sbjct 3280575 --GGTCTTGCGACCCTTACCAGCCTTCTCATACTTCTCGTACAGAGCC--TCGAACTCCT 3280630 Query 69527 CTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCAT 69586 | || | || | | || ||||| || || |||||||| | | ||| || | | Sbjct 3280631 CACCGTAGCAGTCGGCGAGGCCGGGACACTCGTTGGGACACATGAGAGTCCAGTCACCGT 3280690 Query 69587 CATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGG 69646 | || || || ||||| || |||||||||||||| ||||| | || || || | | Sbjct 3280691 TCTTCTCGACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCCAGGAACAGGTCGCGAG 3280750 Query 69647 TTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAAT 69706 | | || || || || || || || || || ||||| | | ||| | | Sbjct 3280751 CGCGAACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCTGCGT 3280810 Query 69707 GCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGT 69766 |||| || || || || || || | | | || ||||| ||||| || |||||||| | || Sbjct 3280811 GCCAGGGCTCAAGGTAGATGGCAAAGGCACCAGGTCGCTTATTGCCACCCTGATCGACGT 3280870 Query 69767 ATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTG 69826 ||| ||||||||| || |||| | ||||| || ||| ||| || || |||| || | Sbjct 3280871 ATCGGGCAGTGTTGTTGAAGACACGGAGCATGGGGGTAACACCGTTGGAGGTACCGTTGG 3280930 Query 69827 TTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGAT-AGACCTATTCCTCCT 69885 | || | || ||| || | || || || | | | | || || || || || Sbjct 3280931 TACCGGCGATGTAAGAACCAGTGGCACGGAT-TCGGTGCACGTTCAGGCCAATACCACCA 3280989 Query 69886 GCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCA 69945 ||||| || || || | |||||| || | || ||||| |||||||| || || || Sbjct 3280990 GCCATCTTGGAAATCATGGCACAAGTCTTGAGAGTATCATAAATACCCTCAATACTGTCC 3281049 Query 69946 TCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAAT 70005 || |||||| | ||| || || || | || | || || |||||||| || Sbjct 3281050 TCCTTCATGTCGACAAGGAAGCATGAGGAGAGCTGGGGCTGGGGGGTACCCGCATTGAAG 3281109 Query 70006 AATGTAGGAGATGCGTGAGTGAA 70028 | || || || ||||||||||| Sbjct 3281110 AGGGTGGGGGAGGCGTGAGTGAA 3281132 >seq10 Length=5928648 Score = 114 bits (126), Expect = 2e-20 Identities = 363/559 (65%), Gaps = 8/559 (1%) Strand=Plus/Plus Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675 |||||| ||||| || || |||||||| | | ||||| |||||||| || || || Sbjct 4470657 GCAGGCAAAGTCGGTGTGAAGACCCTCATCACGAGATATTAACTCGTTAGAGAAGGTCAG 4470716 Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735 || ||||| ||||||||||| |||||||| || |||| |||||| | || || || Sbjct 4470717 ACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCACCGCTGAAAAA 4470776 Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATT---ATG 39792 ||| || || || || || || ||||| || | || | | | || || || Sbjct 4470777 GATACCCTCGACGGCAGCGAAGGCAACGAGACGCTGGGCAAAGGAAGAGTCCTTGTCCTG 4470836 Query 39793 TATCCA-CTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCAT 39851 ||||| | || ||||| || || ||||| | ||||| || || || || || | Sbjct 4470837 GATCCATCGGATG-GCCCAGTCGGCCTTCTTGCGGATGCAAGGGATGGTCTCAATGGCGT 4470895 Query 39852 TAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACA 39911 | ||||| || | | | || || | ||| || || || | ||| || Sbjct 4470896 TGAAGAGGTAGGTTCGCTGGGAAGGCTCCTTGATATAGGTGTCAATGAGCAGGGAGTAGG 4470955 Query 39912 TTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAA 39971 | || || |||||||| || ||| ||||| || ||||| || |||| || || | | Sbjct 4470956 TCTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGAGCCTCGGGGA 4471015 Query 39972 TTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGG 40031 | || ||||| | |||| || | | || || || || || || ||| |||| Sbjct 4471016 TCTGGACCTCGCCGCTGAATCGCTCAACAAGGTTCTCGTTGACGATGCCGTCAGAGGCGG 4471075 Query 40032 CAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCA---ATTTATTCC 40088 |||| || || | | || || || | | || |||| |||| || |||| Sbjct 4471076 CAAAGAAGGCAAGAATGTGAGAGATGAAGAACTGCTCGTCGGAGGTCAGGCGGTTGTTCC 4471135 Query 40089 AGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCT 40148 |||| | || ||| || || | ||| | || || || ||||| || || ||||| |||| Sbjct 4471136 AGTCGTGGAGATCCTTGGACAGATCAATCTCCTCCGCAGTCCAGAAAGAGGCCTCGGCCT 4471195 Query 40149 TTTTGTACATGTTCCATAT 40167 | |||||||| | ||| || Sbjct 4471196 TCTTGTACATCTGCCAGAT 4471214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908654031880