Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20solani_20[genbank_20GCA_5F002215905.1_202017-07-07] 17 sequences; 45,813,297 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq11 201 1e-46 seq10 138 1e-27 >seq11 Length=4934405 Score = 201 bits (222), Expect = 1e-46 Identities = 1164/1846 (63%), Gaps = 55/1846 (3%) Strand=Plus/Plus Query 117807 AACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCC 117866 ||||||||||| || |||| | ||| ||||||||||| || ||||| || || Sbjct 3279472 AACTGAATGGGAGCAGCGGCAGCCTGCGTTCGCAGGTAGTACATGCCTGTCTTCAGACCG 3279531 Query 117867 TGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACTTTCCATGAAG 117926 |||||||| | | ||||| || | |||| | ||| || | |||| | Sbjct 3279532 AGCTTCCAGCCGGCAAAGTGCATGCTGGTGATCTTGCCCATGGTGGGGTCCTTCATGTGG 3279591 Query 117927 AGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCACA 117986 | ||| | | ||||| ||||| |||||| || || || |||||||| | | || Sbjct 3279592 ATGTTGAGAGACTGGGACTGATCAATGAAGGCACCTCGGTCGGCCGCCATCTGGACGAC- 3279650 Query 117987 TCCTTCATCTTG---ATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATA 118043 || || | || ||||| || ||| ||||||| ||| | ||| | || ||| Sbjct 3279651 --CTGGCGCTGGGAAATCTCCCAAACGGTCTTGTAGAGAGCCTTGACCTCAGCGGGAATA 3279708 Query 118044 TCCACGATATTTTGGATGGATCCACCC---GCCTTGACCATGAGATCCTTCATATCCTTT 118100 | ||| || |||||||| || | || ||| || | |||||| | Sbjct 3279709 TTGGGGATGTTCTGGATGGAACCGTTCTCAGCAATGATTCTG---TTCTTCATGGAATCA 3279765 Query 118101 GACCAGAGACCAATCTTTTTGAGATCCT----CCACGAGATGCTTATTGACAACAACAAA 118156 ||||| || || || | |||||||| | || || | || || || || Sbjct 3279766 GACCACAGGCCCATATCGACGAGATCCTTGAGCAACCAGGGG----TTAACGACCTGGAA 3279821 Query 118157 CTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATT 118216 ||| || |||||| || | | |||||||||||| || || ||||| |||||||| || Sbjct 3279822 CTCGCCAGCGAGGACACGACGCTGATAGATATTGGAGGTATAAGGCTCGAAGCACTCGTT 3279881 Query 118217 GTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACG 118276 |||||||| ||| || | ||| || ||||||||||| || | || || ||||| || Sbjct 3279882 GTTACCCAGGATCTGCGAAGTGCTAGCAGTGGGCATGGGGGCAAGCAGCAGACTGTTGCG 3279941 Query 118277 GAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTCTC 118336 | ||| | ||| | | | ||| |||||| |||||||| || | | || Sbjct 3279942 GGTACCATGCTCCTTGACCTGCTCCCTGAGAGACTCCCAGTCCCAGAGGTCAGAGGGCTT 3280001 Query 118337 CCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTC 118396 | | | |||||| || |||||||| ||||| | || || || || |||| || || Sbjct 3280002 CACTTTCCACATGTCGAACTGGAGAATACCCTCAGAGGCGGGAGAGCCCTTGAAGGTGGA 3280061 Query 118397 ATATGGGCCCTCAACCTCCGCCAATT---CGGAGCTCGCCTCGAGGGCTGCGTGATACAT 118453 || || ||||| ||| || | | |||| || |||||| || || || || Sbjct 3280062 GTAGGGACCCTCCTCCTTGGCGAGCTGCACGGA---AGCAGTGAGGGCAGCATGGTAGAT 3280118 Query 118454 TGTTTCAAAAATGCGAGCATTCATTGC-CTTG-GCCTCGTCGGAATCAAACGCGAGTCGG 118511 || ||||| || | |||| || || | ||||| || || || | | | | Sbjct 3280119 GGTCTCAAAGATCTGCTTGTTCA--GCTCTCGAGCCTCAGGAGACTCGAAAG-GCATGCG 3280175 Query 118512 CACA-AAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCAT 118570 || | || || |||| || ||||| |||||||||| ||||| || || |||| ||| Sbjct 3280176 CAGAGCAAGGAAAGCATCGGCAAGACCCTGGACACCGACACCAATGGGCCGGTGTCGCAT 3280235 Query 118571 ATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATT 118630 || || ||||| ||||| || ||| |||||| | ||| || || || Sbjct 3280236 GTTGCTGTTGCGAGCTTCAGGAACGGGGTAGTGGTTCACATCGATGATCCTGTTCAGGTT 3280295 Query 118631 TTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTC-TCTT 118689 |||| || ||||| || || ||||| | | | ||| | | | | || || | Sbjct 3280296 GCGAACGACAGTCTGTGTGACCTCGTGTAGCTTCTGGAAGTCATAGCAG-GCCTCGTCGT 3280354 Query 118690 CATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTAT 118749 |||| | |||||||||| || || || || || |||| |||||| Sbjct 3280355 AGTTGATGAAAGAGGGAAGGGCGAGGGAGGCAAGGTTGCAGACAGCAACCTCATCAGGGG 3280414 Query 118750 CAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTT 118809 || |||||| ||||| || ||||| | ||| || || |||||| || | |||||| | Sbjct 3280415 CACAGTACTCGATAATCTCGGTGCAAAGGTTGGAGCTGCGAATGGTACCAAGGTTCTTCT 3280474 Query 118810 GATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTT 118869 | || ||| ||| || ||||||||| |||||| | || | || ||||| || | Sbjct 3280475 GGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTGCCAGTCTCAGTCT 3280534 Query 118870 GGGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCC 118928 | | || ||| || || | ||||| | || | || || ||| ||| || ||| Sbjct 3280535 GAGCCTCGAGGATGGCATACCAGAGCTTCTG-GGCCTTCA---TGGTCTTG---CGACCC 3280587 Query 118929 T------CTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAG 118982 | | | ||| ||||| ||| || || || ||||| ||||| | || | | Sbjct 3280588 TTACCAGCCTTCTCATACTTCTCGTACAGAGCCTCGAACTCCTCACCGTAGCAGTCGGCG 3280647 Query 118983 AGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTC 119042 || || || || | || || | ||||| ||| | ||| || ||| || |||||| Sbjct 3280648 AGGCCGGGACACTCGTTGGGACACATGAGAGTCCAGTCACCGTTCTTCTCGACACGCTTC 3280707 Query 119043 ATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCC 119102 |||||||| || || |||||||| ||| ||| || || ||| |||| | || || | Sbjct 3280708 ATGAAGAGATCGGGAATCCAGAGAGCCAGGAACAGGTCGCGAGCGCGAACCTCCTCCTTG 3280767 Query 119103 CCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTAC 119162 || || || |||| || | || || | || ||| |||||||| || || ||||| Sbjct 3280768 CCGTGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAG 3280827 Query 119163 ACCGCGATTGACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTA 119219 | || | | || || | ||| |||| | || || | |||||| ||| Sbjct 3280828 ATGGCAAAGGCACCAGGTCGCTTATTGCCACCCTGATCGACGTATCGGGCAGTGTTGTTG 3280887 Query 119220 AATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGAC 119279 || ||||| ||||| || | | ||| | ||| || || || || || ||| Sbjct 3280888 AAGACACGGAGCATGGGGGTAACACCGTTGGAGGTACCGTTGGTACCGGCGATGTAAGAA 3280947 Query 119280 TTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGC 119339 | |||| | || ||| | || || |||||||| || ||| ||| || || Sbjct 3280948 CCAGTGGCACGGATTCGGTGCACGTTCAGGCCAATACCACCAGCCATCTTGGAAATCATG 3281007 Query 119340 GCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGG 119399 || || | ||||| | | || || || || || ||| |||| | ||| ||| Sbjct 3281008 GCACAAGTCTTGAGAGTATCATAAATACCCTCAATACTGTCCTCCTTCATGTCGACAAGG 3281067 Query 119400 AAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGG 119459 ||||| || | || ||| ||| ||||| || |||||||| || || | ||||| Sbjct 3281068 AAGCATGAGGAGAGCTGGGGCTGGGGGGTACCCGCATTGAAGAGGGTGGGGGAGGCGTGA 3281127 Query 119460 ATGAACATACCTTG--GGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCC 119517 ||| | | |||| ||||| || ||| ||||| | ||| ||||| || | Sbjct 3281128 GTGA--AGAACTTGCTCGACATGAGGTTGTAAGTCTCGAGGACACGCTCAATGTTGTCAC 3281185 Query 119518 CGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCAT 119577 | || |||| | || ||||| | ||||| ||||| || | | | |||| Sbjct 3281186 CCCAGATGCCGACAGCCACACGCATGATCATGTGCTGGGGGCGCTCAACAATCTTGCCAT 3281245 Query 119578 CGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAATA 119623 | | | | |||||||| ||| | |||||||| ||||| || Sbjct 3281246 CAATCTTGAGGAGGTAAGATCGCTCAAGGGTCTTGAAGCCAAAGTA 3281291 >seq10 Length=5928648 Score = 138 bits (152), Expect = 1e-27 Identities = 527/813 (65%), Gaps = 17/813 (2%) Strand=Plus/Plus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 ||||| || || ||||||||||||||||| ||||| || ||| ||| |||||||| Sbjct 4470373 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCCAGAGAGATGTTCTCCATG 4470432 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAAT-TGCTGGCACTCCAATCTGTTTGAGGAGACG 129846 || || || ||||| || || | | | || | | | | || ||||| Sbjct 4470433 AAGTCGAAGGGGTTGGCGGACTTGTAGACCTTCTCGTTGCCGAGGGCGACC-AGAAGACG 4470491 Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906 || | |||| |||| ||||||| ||| |||| |||||| |||| ||| || Sbjct 4470492 GTCAGCGACGAACTCGATGTACTGCTTCATGAGATCGGCGTTCATGCCGAGAAGGGCGCA 4470551 Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTG 129966 ||||| || || | |||| ||| ||||||| || || || | |||| | || Sbjct 4470552 GGGGAGAGCCTCAGTCAGGAACTCCTGCTCAATGGTGACGGCATCAGTGATGATGTCCTG 4470611 Query 129967 AATGGTCTCCGTGCCAG---GTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTC 130023 ||| || | ||| || | | ||| | | | || ||| || |||||| || Sbjct 4470612 GATGACCTGCTTGCTAGCACGGCCCTTGAGGTGGGAGTGGAGGAGG--CA-GGCAAAGTC 4470668 Query 130024 CTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAG 130083 ||| |||||||| ||||| || || | || || |||||| |||||| |||||||| Sbjct 4470669 GGTGTGAAGACCCTCATCACGAGATATTAACTCGTTAGAGAAGGTCAGACCGGGCATGAG 4470728 Query 130084 ACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCAC 130143 ||| |||||||| | |||||| || | | ||| | || ||| ||||| ||||| || Sbjct 4470729 ACCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCACCGCTGAAAAAGATACCCTCGAC 4470788 Query 130144 ACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATCAAACCACTTCA 130202 ||||| |||| |||||||| |||||||| | | | |||| | | ||| | Sbjct 4470789 GGCAGCGAAGGCAACGAGACGCTGGGCAAAGGA-AGAGTCCTTGTCCTGGATCCATCGGA 4470847 Query 130203 TCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCT 130262 | ||||| | ||||| || ||| || |||| ||||| || || | ||||| | Sbjct 4470848 TGGCCCAGTCGGCCTTCTTGCGGATGCAAGGGATGGTCTCAATGGCGTTGAAGAGGTAGG 4470907 Query 130263 TCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGA 130322 | | || || || ||||| || | || ||||| || || || ||| |||| Sbjct 4470908 TTCGCTGGGAAGGCTCCTTGATATAGGTGTCAATGAGCAGGGAGTAGGTCTCGGAGTGGA 4470967 Query 130323 CCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCA 130381 | | ||| || | ||| | ||||||| | || || ||| ||||| ||||| Sbjct 4470968 TGTTCTCCATCAT-GATCTGGAAACCGTAGAAGCATCGAGCCTCGGGGATCTGGACCTC- 4471025 Query 130382 TCTGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGC 130440 | || ||| | | | | ||||| || || || || || | ||||| || || Sbjct 4471026 GCCGCTGAATCGCTCAACAAGGTTCTCGTTGACGATGCCGTCAGAGGCGGCAAAGAAGGC 4471085 Query 130441 CAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCAAG 130497 || || | ||||| ||| || | | ||| || | |||||||||| || Sbjct 4471086 AAGAATGTGAGAGATGAAGAACTGCTCGTCGGAGGTCAGGCGGTTGTTCCAGTCGTGGAG 4471145 Query 130498 ATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 |||||| || ||||| | ||||||||||||||| Sbjct 4471146 ATCCTTGGACAGATCAATCTCCTCCGCAGTCCA 4471178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618435068582520