Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20solani_20[genbank_20GCA_5F002215905.1_202017-07-07] 17 sequences; 45,813,297 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq1 122 7e-23 >seq1 Length=6466812 Score = 122 bits (134), Expect = 7e-23 Identities = 484/753 (64%), Gaps = 68/753 (9%) Strand=Plus/Minus Query 29759 TGAGGGTCGTAACCCTCCAGGGAGAAATCCTCTGCCTTAAAGTCGTCCAGGCTCTCCACC 29818 |||||||| || |||| | | || ||||| || || | | || | ||| || || Sbjct 3745664 TGAGGGTCATAGCCCTTGATGACAAAGTCCTCCGCTTTCCACCCATCAATGCTGCCCCCC 3745605 Query 29819 CTC---CTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTC 29875 || | | | ||| |||| |||||| | ||| || | ||| || || || || Sbjct 3745604 TTCTCTCGGGTGATCTCCAGTTCTGGAAAGTTGCGGGGTTCACGCTCCAGTTGCGTGTTG 3745545 Query 29876 AGCGGTTCCACGTTATCCAGGTAGACGTGAGCGTCTCCCAGGTTGTGGACAAACTCTCCC 29935 || | ||| |||| || || |||||||| ||||| |||| | ||| | | || || Sbjct 3745544 AGGGCTTCGACGTGGTCAAGATAGACGTGTGCGTCGCCCATGACGTG-AGTGAGGCTGCC 3745486 Query 29936 -GGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTT 29994 ||| | | | || ||| || |||||||||| || || | | ||||||||| ||||| Sbjct 3745485 AGGTACCAACTCGCAGACATGCGCCATCATGTGTGTCAGCAATGCGTAGCTGGCAATGTT 3745426 Query 29995 AAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACG--AGA----- 30047 || || || || || |||||||| | || | ||||||||||||||| ||| Sbjct 3745425 GAATGGAACACCTAGGCCCATGTCGCAAGATCGCTGGTAGAGCTGACAGTGTAGATGGCC 3745366 Query 30048 ---------GCTCTC-----CGTCG--CT----------------CACGTAAAACTG--- 30072 | |||| ||||| || |||||| || || Sbjct 3745365 CTGGGGCTTGGTCTCGGGGTCGTCGTCCTTTCGTCGGGGGTATGACACGTAGAATTGGGC 3745306 Query 30073 ACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCA 30132 | ||||| |||||||| || || |||| || ||| ||| ||||||||| | Sbjct 3745305 AAACATG---TGGCACGGTGGGAGGACCATCTTCTTCAGGTCGGCGGGATTCCAGGCGGA 3745249 Query 30133 CACGATGATGCGCCTGTCTTCTGGGTTG-TTC----CTGATGAGGTC-CACGGCGTTTTG 30186 | ||| | || | || | ||||||| ||| || ||| | ||||| Sbjct 3745248 AAGGATCAGACGACGATCATATGGGTTGGTTCGCAGCTTGTGAATAATCTCGGCG----- 3745194 Query 30187 CAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAA 30246 ||||| || || ||| |||| |||||| | | | ||| ||||||||| || || Sbjct 3745193 -AGCTGGTCGACTCCCTGGCCCGTGTAGTCCGTCTTGGCGTCGACGTACTCTGCGCCAAA 3745135 Query 30247 ATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCC 30306 |||| ||||||||| |||||||| || || ||||| || | || | ||| | || ||| Sbjct 3745134 GTGCCGCCACTGGAAGCCGTACACGGGGCCAAGGTCGCCGACCTCGCGGTGGTTGAGGCC 3745075 Query 30307 CCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTT--TACCCCCTTCTCA 30364 || || | || || | ||| || ||| ||||||||||||| | || | || | Sbjct 3745074 GAGGTTATCGAGGAACTCGCGGGATCCATTGCCGTCCCAGATCTTGATGCCGGCCTCGCT 3745015 Query 30365 GAGAGCTCTTTGGAGTTTGTG-GACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGC 30423 ||| ||| ||||| |||| ||||| ||||||||| || ||||| | | ||| || Sbjct 3745014 GAG-GCT-GGTGGAGGATGTGTTGCCCTC-GACGAACCAGAGGAGCTCGGCGATGACAGC 3744958 Query 30424 CTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30456 |||||| | |||||| ||||||||||| Sbjct 3744957 GCGGGTAAAGACGCGCTTGGTGGTGAGGAGGGG 3744925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406310315817564