Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20solani_20[genbank_20GCA_5F002215905.1_202017-07-07] 17 sequences; 45,813,297 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq13 100 2e-16 >seq13 Length=4347623 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 27000 GTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAG 27059 || || || ||||| |||||| |||| || || || ||||| | |||||| |||| || Sbjct 2711579 GTCAAGACCCTGACTGGCAAGACTATCACCCTCGAGGTGGAGTCTTCCGACACGATCGAC 2711638 Query 27060 ATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATA 27119 | ||||| ||| || || ||||| || ||||| || || ||||| ||||| | || Sbjct 2711639 AACGTCAAGTCAAAGATCCAGGACAAGGAGGGCATTCCTCCTGATCAGCAGCGCCTGATC 2711698 Query 27120 TACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAG 27179 | || ||||| || | || || | ||| | |||| ||||||||||| |||||| Sbjct 2711699 TTTGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTCGCCGACTACAACATTCAGAAGGAG 2711758 Query 27180 TCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||| | || | ||| | || | || ||||| || Sbjct 2711759 TCCACCCTCCACCTCGTTCTCCGCCTTCGCGGTGGTAT 2711796 Score = 91.5 bits (100), Expect = 1e-13 Identities = 145/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 27010 TGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAAC 27069 |||| |||||| | || || || || || || | || || | || || | ||||| Sbjct 2711311 TGACGGGCAAGACCATCACCCTCGAGGTTGAGTCCTCTGATACCATCGACAATGTCAAGT 2711370 Query 27070 AAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCA 27129 || ||||| ||||| || ||||| || || ||||| ||||| | || | |||||||| Sbjct 2711371 CGAAGATTCAGGACAAGGAGGGCATCCCTCCTGATCAGCAGCGCCTGATTTTCGCCGGCA 2711430 Query 27130 AACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTAC 27189 | || | || || | ||| ||||||||||||| || || |||||||| || | | Sbjct 2711431 AGCAGCTTGAGGATGGCCGCACCCTTTCCGATTACAATATCCAGAAGGAGTCCACTCTCC 2711490 Query 27190 ATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || | || | ||| | || |||||||| Sbjct 2711491 ATCTCGTCCTCCGTCTCCGTGGTGGCAT 2711518 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || ||||| || || ||| | || ||||| || || || | | Sbjct 2712023 ATGCAGATCTTTGTCAAGACTCTCACTGGAAAGACAATCACTCTGGAGGTCGAGTCCAGC 2712082 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || || || ||||| ||||| || || || || ||||| || Sbjct 2712083 GATACTATTGATAATGTGAAGTCCAAGATTCAGGACAAGGAGGGTATCCCCCCCGACCAG 2712142 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | || || || || |||| || || ||| | || || |||||| Sbjct 2712143 CAGCGACTTATCTTTGCTGGTAAGCAGCTGGAGGATGGTCGCACCCTCTCTGACTACAAC 2712202 Query 27168 ATTCAAAAGGAGTCGACC 27185 ||||| ||||| |||||| Sbjct 2712203 ATTCAGAAGGAATCGACC 2712220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434918307579840