Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20solani_20[genbank_20GCA_5F002215905.1_202017-07-07] 17 sequences; 45,813,297 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq1 87.8 2e-12 >seq1 Length=6466812 Score = 87.8 bits (96), Expect = 2e-12 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 34636 CTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAG 34695 ||| |||||||| || ||||| | |||||||| |||| || || ||||||||||| || Sbjct 3745377 CTGTCAGCTCTACCAGCGATCTTGCGACATGGGCCTAGGTGTTCCATTCAACATTGCCAG 3745436 Query 34696 TTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGG 34746 ||||| |||| || ||||||| || |||||| | |||||| ||||| Sbjct 3745437 CTACGCATTGCTGACACACATGATGGCGCATGTCTGCGAGTTGGTACCTGG 3745487 Score = 87.8 bits (96), Expect = 2e-12 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 6599 CCAGGAACCAACCCCACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATG 6658 ||||| |||||| | |||||| || ||||||| || |||| ||||| || |||||| Sbjct 3745487 CCAGGTACCAACTCGCAGACATGCGCCATCATGTGTGTCAGCAATGCGTAGCTGGCAATG 3745428 Query 6659 TTGAACGGCACCCCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAG 6709 ||||| || || |||| |||||||| | ||||| || |||||||| ||| Sbjct 3745427 TTGAATGGAACACCTAGGCCCATGTCGCAAGATCGCTGGTAGAGCTGACAG 3745377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448262304744240