Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20solani_20[genbank_20GCA_5F002215905.1_202017-07-07] 17 sequences; 45,813,297 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq12 102 7e-17 seq13 84.2 2e-11 >seq12 Length=8749402 Score = 102 bits (112), Expect = 7e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 |||| || || |||||||| || || || || || ||| || || || | || || Sbjct 4927416 ACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCG 4927357 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| ||||| ||||| || || ||||||||||||| ||| | || ||| |||||| | Sbjct 4927356 AGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGG 4927297 Query 39196 ATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 || || |||| ||| | | | || ||| |||||||| || | ||||| | || Sbjct 4927296 ATCTTGGACTTGA-CGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATGGTCTT 4927238 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCATCTT 39287 ||||| || || || || ||||| |||||||| Sbjct 4927237 CCCCGTAAGGGTCTTGACGAAGATCTGCATCTT 4927205 >seq13 Length=4347623 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 39094 TCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAAT 39153 || || || || || || || | || || || | || || ||||| || || ||||| Sbjct 2712213 TCCTTCTGAATGTTGTAGTCAGAGAGGGTGCGACCATCCTCCAGCTGCTTACCAGCAAAG 2712154 Query 39154 ATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTC 39213 ||||| ||||||||||||| ||| | | ||| |||||| || || || | | Sbjct 2712153 ATAAGTCGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGAATCTTGGACTTCACATTA 2712094 Query 39214 GCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACA 39273 | | |||||||| ||||| || |||| ||||| | ||||| || || || || ||| Sbjct 2712093 TCAATAGTATCGCTGGACTCGACCTCCAGAGTGATTGTCTTTCCAGTGAGAGTCTTGACA 2712034 Query 39274 AAGATTTGCAT 39284 ||||| ||||| Sbjct 2712033 AAGATCTGCAT 2712023 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429545511003521