Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20solani_20[genbank_20GCA_5F002215905.1_202017-07-07] 17 sequences; 45,813,297 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq1 98.7 8e-16 >seq1 Length=6466812 Score = 98.7 bits (108), Expect = 8e-16 Identities = 197/289 (68%), Gaps = 5/289 (2%) Strand=Plus/Minus Query 29530 GTGAGGGTCGTAGCCCTCCAGGGAGAAATCCTCTGCCTTAAAGTCGTCCAGGCTCTCCAC 29589 ||||||||| ||||||| | | || ||||| || || | | || | ||| || | Sbjct 3745665 GTGAGGGTCATAGCCCTTGATGACAAAGTCCTCCGCTTTCCACCCATCAATGCTGCCCCC 3745606 Query 29590 CCTC---CTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAATCCT 29646 | || | | | ||| |||| |||||| | ||| || | ||| || || | | Sbjct 3745605 CTTCTCTCGGGTGATCTCCAGTTCTGGAAAGTTGCGGGGTTCACGCTCCAGTTGCGTGTT 3745546 Query 29647 CAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCC 29706 || | ||| ||||||||||| |||||||| || || |||| | ||| | | || | Sbjct 3745545 GAGGGCTTCGACGTGGTCAAGATAGACGTGTGCGTCGCCCATGACGTG-AGTGAGGCTGC 3745487 Query 29707 C-GGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGT 29765 | ||| | | | || ||| || |||||||||| || || | | ||||||||| |||| Sbjct 3745486 CAGGTACCAACTCGCAGACATGCGCCATCATGTGTGTCAGCAATGCGTAGCTGGCAATGT 3745427 Query 29766 TAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCA 29814 | || || || || || |||||||| | || | |||||||||||| || Sbjct 3745426 TGAATGGAACACCTAGGCCCATGTCGCAAGATCGCTGGTAGAGCTGACA 3745378 Score = 89.7 bits (98), Expect = 4e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076 || |||| ||||||||| |||||||| || || ||||| || | || | ||| | || | Sbjct 3745136 AAGTGCCGCCACTGGAAGCCGTACACGGGGCCAAGGTCGCCGACCTCGCGGTGGTTGAGG 3745077 Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30136 || || || | || || | ||| || ||| ||||||||||||| | || |||| Sbjct 3745076 CCGAGGTTATCGAGGAACTCGCGGGATCCATTGCCGTCCCAGATCTTGATGCCGGCCTCG 3745017 Query 30137 GAGAGCTCTTTGGAGTTTGTGGA-CCCTCTGACGAACCACAGCAGCTCCTCCACGACGGC 30195 ||| ||||| |||| ||||| ||||||||| || ||||| | | ||| || Sbjct 3745016 CTGAGGCTGGTGGAGGATGTGTTGCCCTC-GACGAACCAGAGGAGCTCGGCGATGACAGC 3744958 Query 30196 CTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30228 |||||| | |||||| ||||||||||| Sbjct 3744957 GCGGGTAAAGACGCGCTTGGTGGTGAGGAGGGG 3744925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406163115848062