Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20solani_20[genbank_20GCA_5F002215905.1_202017-07-07] 17 sequences; 45,813,297 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq1 109 4e-19 >seq1 Length=6466812 Score = 109 bits (120), Expect = 4e-19 Identities = 478/751 (64%), Gaps = 64/751 (9%) Strand=Plus/Minus Query 27025 TGAGGGTCGTAACCCTCCAGGGAGAAATCCTCTGCCTTAAAGTCGTCCAGGCTCTCCACC 27084 |||||||| || |||| | | || ||||| || || | | || | ||| || || Sbjct 3745664 TGAGGGTCATAGCCCTTGATGACAAAGTCCTCCGCTTTCCACCCATCAATGCTGCCCCCC 3745605 Query 27085 CTC---CTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTC 27141 || | | | ||| |||| |||||| | ||| || | ||| || || || || Sbjct 3745604 TTCTCTCGGGTGATCTCCAGTTCTGGAAAGTTGCGGGGTTCACGCTCCAGTTGCGTGTTG 3745545 Query 27142 AGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCC 27201 || | ||| ||||| || || |||||||| ||||| |||| | ||| | | || || Sbjct 3745544 AGGGCTTCGACGTGGTCAAGATAGACGTGTGCGTCGCCCATGACGTG-AGTGAGGCTGCC 3745486 Query 27202 -GGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTT 27260 ||| | | | || ||| || |||||||||| || || | | ||||||||| ||||| Sbjct 3745485 AGGTACCAACTCGCAGACATGCGCCATCATGTGTGTCAGCAATGCGTAGCTGGCAATGTT 3745426 Query 27261 AAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACG--AGA----- 27313 || || || || || |||||||| | || | ||||||||||||||| ||| Sbjct 3745425 GAATGGAACACCTAGGCCCATGTCGCAAGATCGCTGGTAGAGCTGACAGTGTAGATGGCC 3745366 Query 27314 ---------GCTCTC-----CATCG--CTT----------------ACGTAAAACTG--- 27338 | |||| | ||| ||| ||||| || || Sbjct 3745365 CTGGGGCTTGGTCTCGGGGTCGTCGTCCTTTCGTCGGGGGTATGACACGTAGAATTGGGC 3745306 Query 27339 ACATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCA 27398 | | ||| |||||||| || || |||| || ||| ||| ||||||||| | Sbjct 3745305 AAACATG---TGGCACGGTGGGAGGACCATCTTCTTCAGGTCGGCGGGATTCCAGGCGGA 3745249 Query 27399 CACGATGATGCGCCTGTCTTCTGGGTTG-TTC----CTGATGAGGTC-CACGGCGTTTTG 27452 | ||| | || | || | ||||||| ||| || ||| | ||||| Sbjct 3745248 AAGGATCAGACGACGATCATATGGGTTGGTTCGCAGCTTGTGAATAATCTCGGCG----- 3745194 Query 27453 CAGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTCTGCTCCGAA 27512 ||||| || || ||| |||| |||||| | | ||| ||||||||| || || Sbjct 3745193 -AGCTGGTCGACTCCCTGGCCCGTGTAGTCCGTCTTGGCGTCGACGTACTCTGCGCCAAA 3745135 Query 27513 ATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCC 27572 |||| ||| ||||| |||||||| || || ||||| || | || | ||| | || ||| Sbjct 3745134 GTGCCGCCACTGGAAGCCGTACACGGGGCCAAGGTCGCCGACCTCGCGGTGGTTGAGGCC 3745075 Query 27573 CCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGA 27632 || || | || || | ||| || ||| ||||||||||||| | || |||| Sbjct 3745074 GAGGTTATCGAGGAACTCGCGGGATCCATTGCCGTCCCAGATCTTGATGCCGGCCTCGCT 3745015 Query 27633 GAGCTCTTTGGAGTTTGTGGA-CCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCT 27691 ||| ||||| |||| ||||| ||||||||| || ||||| | | ||| || Sbjct 3745014 GAGGCTGGTGGAGGATGTGTTGCCCTC-GACGAACCAGAGGAGCTCGGCGATGACAGCGC 3744956 Query 27692 TCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 27722 |||||| | |||||| ||||||||||| Sbjct 3744955 GGGTAAAGACGCGCTTGGTGGTGAGGAGGGG 3744925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369507123442727