Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04-
27] 103 sequences; 46,940,970 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq54 140 7e-28
>seq54
Length=1261221
Score = 140 bits (154), Expect = 7e-28
Identities = 163/220 (74%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 230414 AGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTTATGG 230473
|||||||| | ||| ||| | || || ||| | ||||||||||| | || |||
Sbjct 1145372 AGGAGTTCCTGACTGAGGCTCTCCCCTGCGCCCTCCTCGGCATGAACGCCAACCTCATGA 1145313
Query 230474 GACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGT 230533
||||||||||| ||||| |||||||| | | || || || || ||||||| || |
Sbjct 1145312 AGCAGTACATCGAGTTCGTCGCCGACCGTCTCCTCGTCGCCCTGGGCAACGAGAAGGTCT 1145253
Query 230534 ACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACT 230593
|||| ||| |||||||| | || |||||| ||| || || || ||||||||||
Sbjct 1145252 ACAAGTCTGCCAACCCCTTCGACTTCATGGAGAACATCTCCCTGGGTGGCAAGACCAACT 1145193
Query 230594 TCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGT 230633
||||||| ||||||||| ||||||| |||| | |||||||
Sbjct 1145192 TCTTCGAGAAGCGTGTCGGTGACTACCAGAAGGCTGGTGT 1145153
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057822604002890
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |