Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04- 27] 103 sequences; 46,940,970 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq54 140 7e-28 >seq54 Length=1261221 Score = 140 bits (154), Expect = 7e-28 Identities = 163/220 (74%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 230414 AGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTTATGG 230473 |||||||| | ||| ||| | || || ||| | ||||||||||| | || ||| Sbjct 1145372 AGGAGTTCCTGACTGAGGCTCTCCCCTGCGCCCTCCTCGGCATGAACGCCAACCTCATGA 1145313 Query 230474 GACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGT 230533 ||||||||||| ||||| |||||||| | | || || || || ||||||| || | Sbjct 1145312 AGCAGTACATCGAGTTCGTCGCCGACCGTCTCCTCGTCGCCCTGGGCAACGAGAAGGTCT 1145253 Query 230534 ACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACT 230593 |||| ||| |||||||| | || |||||| ||| || || || |||||||||| Sbjct 1145252 ACAAGTCTGCCAACCCCTTCGACTTCATGGAGAACATCTCCCTGGGTGGCAAGACCAACT 1145193 Query 230594 TCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGT 230633 ||||||| ||||||||| ||||||| |||| | ||||||| Sbjct 1145192 TCTTCGAGAAGCGTGTCGGTGACTACCAGAAGGCTGGTGT 1145153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057822604002890