Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04- 27] 103 sequences; 46,940,970 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq28 176 5e-39 >seq28 Length=4887614 Score = 176 bits (194), Expect = 5e-39 Identities = 417/629 (66%), Gaps = 47/629 (7%) Strand=Plus/Minus Query 145681 TTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCC 145740 || |||| || || |||| || |||||||| ||||| |||| |||||| | ||| Sbjct 3687990 TTGAGGGCATCGACATGGTCAAGATAGACGTGTGCGTCGCCCATGACGTGAGTCAAGCTG 3687931 Query 145741 CCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATG 145800 || || | | | || ||| || | ||||| ||||||| | ||||||||| ||| Sbjct 3687930 CCAGGTACCAATTCGCAGACGTGCGCCATCATGTGTGTCAGCAACGCGTAGCTGGCAATG 3687871 Query 145801 TTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCC 145860 ||||| || || || || |||||||| | || |||||||| ||||||||| || | Sbjct 3687870 TTGAACGGAACGCCAAGACCCATGTCGCAGGATCGCTGGTAGAGCTGGCAGTGTAGGTGG 3687811 Query 145861 CC----------GCC------------------CGCC-----------ACGTAGAACTG- 145880 || ||| || | ||||| ||||| Sbjct 3687810 CCTTGGGGCTTGGCCTCGGGGTCGTCATCCTTTCGTCGGGGGTAGGAGACGTAAAACTGA 3687751 Query 145881 GCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGT 145940 ||| | | ||||||||| || ||| |||| ||| || || ||||||||||||| Sbjct 3687750 GCAAAC-ATGTGGCAGGGTGGGAGGACCATCTTCTTCAGATCGGCGGGGTTCCAGGCGGA 3687692 Query 145941 GAGGACGAGCCTCCTGCTC-TCGGGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCT 145999 |||| || | | | || | ||||| | | || || | || ||||| Sbjct 3687691 AAGGATCAGACGAC-GATCGTATGGGTTGGTGCGCAGCTTGTGAATAATCTCGGCGAGCT 3687633 Query 146000 GGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCC 146059 |||| || ||||| ||| ||| || ||||||| ||| |||||| |||| || ||||||| Sbjct 3687632 GGTCGACTCCCTGGCCCGTGTAGTCCGTCTTGGCGTCGACGTACTCGGCACCAAAGTGCC 3687573 Query 146060 TCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCC 146119 ||||||||| ||||| ||||| || ||||| || ||| | ||| || ||| Sbjct 3687572 GCCACTGGAAGCCGTACACGGGGCCAAGGTCGCCAACCTCGCGGTGGTTGAGACCGAGGT 3687513 Query 146120 GGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CCTCGCGGAGAG 146177 | ||||||| || ||||| || ||| ||||||||||||||| ||| |||||| ||| | Sbjct 3687512 TGTCGAGGAACTCGCGGGAGCCATTGCCGTCCCAGATCTTGATGCCGGCCTCGCTGAG-G 3687454 Query 146178 CTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCA 146237 || | ||||| ||| ||| |||||||||||| ||||| ||| || | | Sbjct 3687453 CT-AGTGGAGGATGTGTTGCCCTCGATGAACCAGAGGAGCTCGGCGATAACGGCGCGGGT 3687395 Query 146238 GAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266 ||||| | ||||||||| || ||||||| Sbjct 3687394 AAAGACGCGCTTGGTGGTGAGGAGGGGGA 3687366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590076040276120