Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04-
27] 103 sequences; 46,940,970 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq28 176 5e-39
>seq28
Length=4887614
Score = 176 bits (194), Expect = 5e-39
Identities = 417/629 (66%), Gaps = 47/629 (7%)
Strand=Plus/Minus
Query 145681 TTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCC 145740
|| |||| || || |||| || |||||||| ||||| |||| |||||| | |||
Sbjct 3687990 TTGAGGGCATCGACATGGTCAAGATAGACGTGTGCGTCGCCCATGACGTGAGTCAAGCTG 3687931
Query 145741 CCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATG 145800
|| || | | | || ||| || | ||||| ||||||| | ||||||||| |||
Sbjct 3687930 CCAGGTACCAATTCGCAGACGTGCGCCATCATGTGTGTCAGCAACGCGTAGCTGGCAATG 3687871
Query 145801 TTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCC 145860
||||| || || || || |||||||| | || |||||||| ||||||||| || |
Sbjct 3687870 TTGAACGGAACGCCAAGACCCATGTCGCAGGATCGCTGGTAGAGCTGGCAGTGTAGGTGG 3687811
Query 145861 CC----------GCC------------------CGCC-----------ACGTAGAACTG- 145880
|| ||| || | ||||| |||||
Sbjct 3687810 CCTTGGGGCTTGGCCTCGGGGTCGTCATCCTTTCGTCGGGGGTAGGAGACGTAAAACTGA 3687751
Query 145881 GCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGT 145940
||| | | ||||||||| || ||| |||| ||| || || |||||||||||||
Sbjct 3687750 GCAAAC-ATGTGGCAGGGTGGGAGGACCATCTTCTTCAGATCGGCGGGGTTCCAGGCGGA 3687692
Query 145941 GAGGACGAGCCTCCTGCTC-TCGGGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCT 145999
|||| || | | | || | ||||| | | || || | || |||||
Sbjct 3687691 AAGGATCAGACGAC-GATCGTATGGGTTGGTGCGCAGCTTGTGAATAATCTCGGCGAGCT 3687633
Query 146000 GGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCC 146059
|||| || ||||| ||| ||| || ||||||| ||| |||||| |||| || |||||||
Sbjct 3687632 GGTCGACTCCCTGGCCCGTGTAGTCCGTCTTGGCGTCGACGTACTCGGCACCAAAGTGCC 3687573
Query 146060 TCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCC 146119
||||||||| ||||| ||||| || ||||| || ||| | ||| || |||
Sbjct 3687572 GCCACTGGAAGCCGTACACGGGGCCAAGGTCGCCAACCTCGCGGTGGTTGAGACCGAGGT 3687513
Query 146120 GGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CCTCGCGGAGAG 146177
| ||||||| || ||||| || ||| ||||||||||||||| ||| |||||| ||| |
Sbjct 3687512 TGTCGAGGAACTCGCGGGAGCCATTGCCGTCCCAGATCTTGATGCCGGCCTCGCTGAG-G 3687454
Query 146178 CTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCA 146237
|| | ||||| ||| ||| |||||||||||| ||||| ||| || | |
Sbjct 3687453 CT-AGTGGAGGATGTGTTGCCCTCGATGAACCAGAGGAGCTCGGCGATAACGGCGCGGGT 3687395
Query 146238 GAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266
||||| | ||||||||| || |||||||
Sbjct 3687394 AAAGACGCGCTTGGTGGTGAGGAGGGGGA 3687366
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590076040276120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |