Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04-
27] 103 sequences; 46,940,970 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq37 123 5e-23
>seq37
Length=4018383
Score = 123 bits (136), Expect = 5e-23
Identities = 383/582 (66%), Gaps = 23/582 (4%)
Strand=Plus/Plus
Query 248782 CTGGACGGCGCGATTGACTACGGCAAAGATTTGGAGTACGATTTCTTTGCTTTCAAAACG 248841
|| ||| ||| |||| ||| | | || || | ||| | | ||||| ||||| ||
Sbjct 713983 CTAGACTCCGCCATTGTCTATGACCGTGACTTCCAATACCAATACTTTGGCTTCAAGACT 714042
Query 248842 CTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATTCAGCACATG 248901
|| ||| ||| || |||||||| |||||||||||||| || || || |||||||||
Sbjct 714043 CTTGAGCGATCCTACCTCCTCAAGATTGATGGCAAGATTGTTGAGCGCCCCCAGCACATG 714102
Query 248902 TTGATGCGAGTGGCTGTCGGGATTCACAAGGATG---ACATAGAGAGCGTGCTCGAGACG 248958
| ||||| || |||||||| || | || || |||| ||| | || ||||||||
Sbjct 714103 ATCATGCGTGTTGCTGTCGGCAT---CTGGGGTGACAACATTGAGCGTGTCCTCGAGACT 714159
Query 248959 TACACCGGAATG-AGTGAACGCTGGATGACACATGCCACACCGACGCTCTTCAACGCCGG 249017
|||| | ||| | | | | | | || |||||| | || || |||||||| || ||
Sbjct 714160 TACAACCTCATGTCGAGCAAG-TTCTTCACCCATGCCTCCCCCACCCTCTTCAATGCGGG 714218
Query 249018 TACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACGACTCTGTCGA 249077
||| | | |||||| ||| ||||| ||| | | |||| | || ||| | | ||
Sbjct 714219 TACTCCCCAGCCTCAGCTCTCCTCATGCTTCCTTGTCGACATGAAGGAGGACAGTATTGA 714278
Query 249078 CGGCATTTATGACACGCTTAAACAGAC---GGCGAAGATTTCTAAATTCGCGGGCGGAAT 249134
|| |||||||| || || | |||| || | |||||| || | || || || ||
Sbjct 714279 GGGTATTTATGATACTCTCA---AGACCTGTGCCATGATTTCCAAGATGGCTGGTGGTAT 714335
Query 249135 CGGTCTCTCCGT-CTCCAACATCCGAGCGAAGGGTTCGTACATCAAAGGTACAAATGGGG 249193
||||| ||| | || | ||||| || | || || |||||| ||||| || ||
Sbjct 714336 TGGTCTGAACGTGCACCGA-ATCCGTGCCACTGGCTCCTACATCGCCGGTACCAACGGTA 714394
Query 249194 TCAGTGATGGTATCGTACCCC--TCCTTCGATGCTTTGAGTCCACCGCCAGGTTCATCAA 249251
| | ||| | |||||| | ||||| ||| | ||| ||| | | | || |
Sbjct 714395 CCTCCAACGGTGT--TACCCCTATGCTTCGTGTCTTCAACAACACTGCCCGATACGTCGA 714452
Query 249252 CCAGGCCGGGCGC---CGAAAGGGGTCGTTCGCCATGTATTTGGAAGTGTGGCACGCCGA 249308
|||| || | ||| || | || ||||| || | || |||||||| ||
Sbjct 714453 TCAGGGTGGCAACAAGCGACCTGGTGCTTTTGCCATCTACCTTGAGCCCTGGCACGCAGA 714512
Query 249309 TATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGA 249350
| | || |||||||| ||| || |||||| ||||||| ||
Sbjct 714513 TGTCTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGA 714554
Score = 84.2 bits (92), Expect = 5e-11
Identities = 109/151 (72%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 254017 TCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCGCTGGCCCGAACCCTGT 254076
|| |||||||||| || || |||||||| || |||||||| || ||||| || | | |
Sbjct 932780 TCTACGGTCCTCCAGGCACCGGCAAGACATCCACCATCCTCGCCCTGGCGCGCCGCATCT 932721
Query 254077 TGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCTTCTGACGAACGCGGGT 254136
|||| | |||||| | || ||||||||||| ||||| || || || || ||
Sbjct 932720 ATGGCGCTGCAAACATGCGCCAGATGGTGCTCGAGCTTAACGCCTCGGATGATCGTGGTA 932661
Query 254137 TGGACGTCGTCCGCGACAAGATCAAGACTTT 254167
| || || || || || |||||||||| ||
Sbjct 932660 TCGATGTGGTGCGTGAGCAGATCAAGACCTT 932630
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073764982963904
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |