Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04- 27] 103 sequences; 46,940,970 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq32 86.0 5e-12 >seq32 Length=3227256 Score = 86.0 bits (94), Expect = 5e-12 Identities = 144/206 (70%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 || || || || || || || |||||||| ||||| ||| ||| |||| || | ||| Sbjct 1807653 TGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTGAGAGTTCGGCCGTCCTCGAGTTGC 1807712 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280 ||||| ||| | || | || |||||||| ||||||||||| || || ||| || Sbjct 1807713 TTGCCGGCGAAGATAAGTCGCTGTTGGTCAGGAGGAATTCCTTCCTTATCCTGAATCTTC 1807772 Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAA-GGTAATGGTT-TTACCTG 15338 ||| || | || || || ||| ||| || || || ||| |||||| || || | Sbjct 1807773 GACTTCACGTTATCGATTGTGTCGGACGATTCCACCTCGAAGGGTGATGGTTCTTTCCAG 1807832 Query 15339 TCAGAGTTTTTACAAAAATTTGCATA 15364 | ||||| || || || ||||||||| Sbjct 1807833 TGAGAGTCTTGACGAAGATTTGCATA 1807858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362178745351923