Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04-
27] 103 sequences; 46,940,970 total letters
Query= NC_004690.1
Length=113220
Score E
Sequences producing significant alignments: (Bits) Value
seq32 86.0 5e-12
>seq32
Length=3227256
Score = 86.0 bits (94), Expect = 5e-12
Identities = 144/206 (70%), Gaps = 2/206 (1%)
Strand=Plus/Plus
Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220
|| || || || || || || |||||||| ||||| ||| ||| |||| || | |||
Sbjct 1807653 TGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTGAGAGTTCGGCCGTCCTCGAGTTGC 1807712
Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280
||||| ||| | || | || |||||||| ||||||||||| || || ||| ||
Sbjct 1807713 TTGCCGGCGAAGATAAGTCGCTGTTGGTCAGGAGGAATTCCTTCCTTATCCTGAATCTTC 1807772
Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAA-GGTAATGGTT-TTACCTG 15338
||| || | || || || ||| ||| || || || ||| |||||| || || |
Sbjct 1807773 GACTTCACGTTATCGATTGTGTCGGACGATTCCACCTCGAAGGGTGATGGTTCTTTCCAG 1807832
Query 15339 TCAGAGTTTTTACAAAAATTTGCATA 15364
| ||||| || || || |||||||||
Sbjct 1807833 TGAGAGTCTTGACGAAGATTTGCATA 1807858
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 362178745351923
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |