Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04- 27] 103 sequences; 46,940,970 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq28 95.1 1e-14 >seq28 Length=4887614 Score = 95.1 bits (104), Expect = 1e-14 Identities = 117/160 (73%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 5330 AGCTGAGCTATCCTGTCTCCCTTCTTAACCTCAAAGTCGCTGTTTCCGAAGTTAAACAGC 5389 ||||| || || | ||| |||| ||| | |||||||||| | ||| ||| || || Sbjct 3789779 AGCTGGGCGATGCGGTCGCCCTCCTTGATCTCAAAGTCGGACTCGCCGTGGTTGAAGAGA 3789838 Query 5390 ACCACCCCGACATTGCCTCGGTAGTCTTCGTCGATAACGCCAGCGCCCACGTCGATAAAG 5449 | ||| ||| | ||||| |||||| ||||||| |||||||||||| |||||| ||| Sbjct 3789839 AGGACCTTGACCTGGCCTCTGTAGTCGGCGTCGATGACGCCAGCGCCCGTGTCGATGAAG 3789898 Query 5450 TGTTTGACCGCAAGGCCGGAACGTGGTGCTATGCGTCCGT 5489 || ||| || || || || || || || ||||| |||| Sbjct 3789899 TGCTTGGAGGCGAGACCAGATCGGGGAGCAATGCGGCCGT 3789938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447749823521360