Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04-
27] 103 sequences; 46,940,970 total letters
Query= NC_005336.1
Length=139962
Score E
Sequences producing significant alignments: (Bits) Value
seq28 95.1 1e-14
>seq28
Length=4887614
Score = 95.1 bits (104), Expect = 1e-14
Identities = 117/160 (73%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 5330 AGCTGAGCTATCCTGTCTCCCTTCTTAACCTCAAAGTCGCTGTTTCCGAAGTTAAACAGC 5389
||||| || || | ||| |||| ||| | |||||||||| | ||| ||| || ||
Sbjct 3789779 AGCTGGGCGATGCGGTCGCCCTCCTTGATCTCAAAGTCGGACTCGCCGTGGTTGAAGAGA 3789838
Query 5390 ACCACCCCGACATTGCCTCGGTAGTCTTCGTCGATAACGCCAGCGCCCACGTCGATAAAG 5449
| ||| ||| | ||||| |||||| ||||||| |||||||||||| |||||| |||
Sbjct 3789839 AGGACCTTGACCTGGCCTCTGTAGTCGGCGTCGATGACGCCAGCGCCCGTGTCGATGAAG 3789898
Query 5450 TGTTTGACCGCAAGGCCGGAACGTGGTGCTATGCGTCCGT 5489
|| ||| || || || || || || || ||||| ||||
Sbjct 3789899 TGCTTGGAGGCGAGACCAGATCGGGGAGCAATGCGGCCGT 3789938
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 447749823521360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |