Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04- 27] 103 sequences; 46,940,970 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq28 105 6e-18 >seq28 Length=4887614 Score = 105 bits (116), Expect = 6e-18 Identities = 127/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 5581 GCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCC 5640 |||||| || ||||| || || ||||||||| ||| | ||| || ||| | ||| Sbjct 3789766 GCGCTCCAGGACGAGCTGGGCGATGCGGTCGCCCTCCTTGATCTCAAAGTCGGACTCGCC 3789825 Query 5641 GAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCC 5700 | |||||| || | || || | ||| | |||||||||||| || ||||| ||||| Sbjct 3789826 GTGGTTGAAGAGAAGGACCTTGACCTGGCCTCTGTAGTCGGCGTCGATGACGCCAGCGCC 3789885 Query 5701 CACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGT 5753 | |||||||||||||||| || || || || |||||||| | |||||||| Sbjct 3789886 CGTGTCGATGAAGTGCTTGGAGGCGAGACCAGATCGGGGAGCAATGCGGCCGT 3789938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430053860147336