Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04- 27] 103 sequences; 46,940,970 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq32 89.7 4e-13 >seq32 Length=3227256 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/191 (71%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595 ||||| ||||||||||| |||| | || ||||||||||||||||||| | | Sbjct 1807438 TCCTTCTGAATGTTGTAGTCAGAGAGGGTGCGACCGTCCTCCAGCTGCTTACCAGCAAAG 1807497 Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGAC 48655 || | |||||||| | | || | || ||||||||| ||| || ||| | | Sbjct 1807498 ATAAGTCGCTGCTGGT-CGGGGGGATACCCTCCTTGTCCTGAATCTTGGACTTCACATTA 1807556 Query 48656 GCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACA 48715 | ||||||||| | ||||| ||| | || ||||| || || |||||||| || ||| Sbjct 1807557 TCAATGGTATCGCTGGACTCGACCTCCAGAGTGATGGTCTTTCCTGTGAGAGTCTTGACA 1807616 Query 48716 AAAATCTGCAT 48726 || |||||||| Sbjct 1807617 AAGATCTGCAT 1807627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421250671198103