Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04-
27] 103 sequences; 46,940,970 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq32 89.7 4e-13
>seq32
Length=3227256
Score = 89.7 bits (98), Expect = 4e-13
Identities = 135/191 (71%), Gaps = 1/191 (1%)
Strand=Plus/Plus
Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595
||||| ||||||||||| |||| | || ||||||||||||||||||| | |
Sbjct 1807438 TCCTTCTGAATGTTGTAGTCAGAGAGGGTGCGACCGTCCTCCAGCTGCTTACCAGCAAAG 1807497
Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGAC 48655
|| | |||||||| | | || | || ||||||||| ||| || ||| | |
Sbjct 1807498 ATAAGTCGCTGCTGGT-CGGGGGGATACCCTCCTTGTCCTGAATCTTGGACTTCACATTA 1807556
Query 48656 GCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACA 48715
| ||||||||| | ||||| ||| | || ||||| || || |||||||| || |||
Sbjct 1807557 TCAATGGTATCGCTGGACTCGACCTCCAGAGTGATGGTCTTTCCTGTGAGAGTCTTGACA 1807616
Query 48716 AAAATCTGCAT 48726
|| ||||||||
Sbjct 1807617 AAGATCTGCAT 1807627
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421250671198103
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |