Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04- 27] 103 sequences; 46,940,970 total letters Query= NC_005946.1 Length=105903 Score E Sequences producing significant alignments: (Bits) Value seq43 82.4 5e-11 >seq43 Length=2522723 Score = 82.4 bits (90), Expect = 5e-11 Identities = 130/180 (72%), Gaps = 6/180 (3%) Strand=Plus/Minus Query 71419 GTCATCCTGGAGGGAAAGGCGTGGGGGTTGATGATGAGGTCGGGCACCACCCCGTCCTTG 71478 ||||| | ||||||| |||||||||||| ||||| | ||| || ||| || ||| || Sbjct 667013 GTCATTCGCGAGGGAATGGCGTGGGGGTTAATGATAATGTCTGGTGTCACACCCTCCCTG 666954 Query 71479 TCGAAGGGCATGTCCTCCTG--GGTCAGGACAGCTCCGCATGTCCCCTTTTGCGCCGTGA 71536 ||||||||| |||||||| ||| ||| | | || ||| ||||| || |||||| Sbjct 666953 CTGAAGGGCATATCCTCCTGTCGGT-AGGTGA-CACCAATTGTACCCTTCTG-TCCGTGA 666897 Query 71537 -ATGACGCAAACTTGTCGCCCATCTCTGGGTGCCTGGGGGTCCTCAGCCTCACCTTGACG 71595 || || |||||||| || |||| || | ||| ||||||| | ||||||||| Sbjct 666896 CGAGAGGCGAACTTGTCACCAATCTGAGGAATCTTGGTCGTCCTCACACGGACCTTGACG 666837 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338764374744312