Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04-
27] 103 sequences; 46,940,970 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq41 98.7 9e-16
seq32 84.2 2e-11
>seq41
Length=1307349
Score = 98.7 bits (108), Expect = 9e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858
|||| ||| | ||| ||||| || | ||| || ||||||| ||| | ||||||
Sbjct 954345 ACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCG 954404
Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918
||||| || || ||||||| | || ||||| || || ||||| || || ||||| |
Sbjct 954405 AGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGG 954464
Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978
|| || | ||||||| | ||| ||||| | || || |||| ||||| || ||
Sbjct 954465 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTC 954524
Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| ||||| || || || |||||||||||
Sbjct 954525 CCCGTAAGGGTCTTGACGAAGATCTGCAT 954553
>seq32
Length=3227256
Score = 84.2 bits (92), Expect = 2e-11
Identities = 151/214 (71%), Gaps = 9/214 (4%)
Strand=Plus/Plus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA--TCC 94855
||| | ||||| || |||||||| || | ||| || || | || || || |||
Sbjct 1807419 CACAAGGTGCAGGGTCGATTCCTTCTGAATGTTGTAGTCAG--AGAGGGTGCGACCGTCC 1807476
Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915
|||||||| || || ||||||| | || ||||| || || ||| |||| || |||||
Sbjct 1807477 TCCAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCGGGGGGA-TACCCTCCTTGTCC 1807535
Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG--TCGACGTCAATCGTGATGG 94973
| ||| || | ||| || | | || || || ||| ||||| || | |||||||
Sbjct 1807536 TGAATCTTGGACTTCACATTATCAATGGTATC-GC-TGGACTCGACCTCCAGAGTGATGG 1807593
Query 94974 TTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| ||||| || ||||| || ||||||||||||||
Sbjct 1807594 TCTTTCCTGTGAGAGTCTTGACAAAGATCTGCAT 1807627
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448290622825080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |