Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04- 27] 103 sequences; 46,940,970 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq37 381 2e-100 seq54 91.5 4e-13 >seq37 Length=4018383 Score = 381 bits (422), Expect = 2e-100 Identities = 1171/1783 (66%), Gaps = 46/1783 (3%) Strand=Plus/Plus Query 363400 AAGACGATGGAGAAATCCTACCTATCTCGT-ATCAATGGTGATATTGTTGAACGCCCGCA 363458 ||||| | ||| ||||||||| ||| || |||| | |||||||| ||||| || Sbjct 714037 AAGACTCTTGAGCGATCCTACCTC-CTCAAGATTGATGGCAAGATTGTTGAGCGCCCCCA 714095 Query 363459 GCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCGATTGA 363518 ||| ||| | |||||||||||| | || ||| | | |||| | | || Sbjct 714096 GCACATGATCATGCGTGTTGCTGTCGGCATCTGGGGTGACAACATTGAGCGTGTCCTCGA 714155 Query 363519 AACATATAAGCTTCTAA-GTGCTCGTGTATTCACGCACGCCACGCCAACAATGTACAATG 363577 || || || || | | || || | ||||| || ||| | || || | | ||||| Sbjct 714156 GACTTACAACCTCATGTCGAGCAAGT-TCTTCACCCATGCCTCCCCCACCCTCTTCAATG 714214 Query 363578 CTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCCA 363637 | || |||| | || ||| | || || ||||| ||| | | |||||||| || | Sbjct 714215 CGGGTACTCCCCAGCCTCAGCTCTCCTCATGCTTCCTTGTCGACATGAAGGAGGACAGTA 714274 Query 363638 TCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAA 363697 | |||||||| | ||| || || |||| ||||| | |||||||||| || || || | Sbjct 714275 TTGAGGGTATTTATGATACTCTCAAGACCTGTGCCATGATTTCCAAGATGGCTGGTGGTA 714334 Query 363698 TTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCGGCACAGGGGG 363755 ||||| | | || | ||| | ||||| || | | ||||| ||| || || Sbjct 714335 TTGGTCTGAACG-TGCACCGAATCCGTGCCACTGG-CTCCTACATCGCCGGTACCAACGG 714392 Query 363756 ATACTCGAATGGGCTGGTTCCC--ATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTC 363813 ||| || || || | ||| ||||||||||| || |||| ||||| | |||||| Sbjct 714393 TACCTCCAACGG--TGTTACCCCTATGCTTCGTGTCTTCAACAACACTGCCCGATACGTC 714450 Query 363814 GACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCC 363873 || |||||||| ||||| || || ||||| || || || ||||| || || Sbjct 714451 GATCAGGGTGGCAACAAGCGACCTGGTGCTTTTGCCATCTACCTTGAGCCCTGGCACGCA 714510 Query 363874 GATATTTTTGAGTTTCTTGAGCTCCGGAAAAAC-ACGGGAA--AAGAGGAATTGCGTGCA 363930 ||| | |||||||| ||||| || || || ||| |||| || |||||| | || || Sbjct 714511 GATGTCTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAAGAGG---TCCGCGCT 714567 Query 363931 CGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGT 363990 || || ||||| || || ||| || | || | || |||||||| || ||| | | Sbjct 714568 CGCGACTTGTTCCTGGCTCTCTGGATTCCCGATCTCTTCATGAAGCGTGTCGAG--AAGA 714625 Query 363991 AAGA--ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTG 364048 | | | ||| | || | || || |||| ||||| ||||| |||| | |||| Sbjct 714626 ACGGTGACTGGACTCTGATGTGTCCCAACGAGTGTCCCGGTCTCGCCGACTGCTACGGTG 714685 Query 364049 ACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTC 364108 | || | | ||||| ||||| |||||||| || || |||| ||| ||||| || Sbjct 714686 AGGAGTTCGAGGCTCTGTACGAGAAGTATGAGAAGGCCGGCAAGGGTCGCAAGACCATGA 714745 Query 364109 CCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATA 364168 || |||||||| |||| ||||||| | || | |||| ||||| || | |||| | Sbjct 714746 AGGCCCAGAAGCTCTGGTATGCCATCCTCGAGGCTCAGACCGAGACTGGTAACCCCTTCA 714805 Query 364169 TGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGC 364228 || | ||||| ||| |||||||||||| ||||||| || |||| ||||| |||| || Sbjct 714806 TGCTCTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACCTGGGTACCATTC-GC 714864 Query 364229 AG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGT 364287 || |||||| || || ||||| || || ||| || || || ||| ||| || ||| Sbjct 714865 AGCTCCAACCTGTGCACTGAGATCATCGAGTACTGTGCCCCTGATGAGGTTGCTGTCTGT 714924 Query 364288 AACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAGATG----GTACT--TTTGACCAC 364341 |||||||| || |||| ||||| | || | || ||| | || | |||| | Sbjct 714925 AACCTTGCCTCTCTCGCCCTTCCCTCTTTCATCAACTATGACGAGGCCTGCTATGACTTC 714984 Query 364342 CAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGACAAG 364401 ||| | || | || || || | || | |||| || ||| | | || || | Sbjct 714985 CAGAAGCTGCACGAGGTCACACAGACTGTCGTTCGCAACCTGAACAGGATCATTGATGTG 715044 Query 364402 AATTATTATCCAATTCCTGAAGC-CG----AGCGTTCTAATATGCGTCATCGCCCGATTG 364456 || | || || |||||||||| || ||| || ||||| || || || |||| Sbjct 715045 AACCACTACCCCGTTCCTGAAGCTCGCAACAGC-----AACATGCGACACCGACCTATTG 715099 Query 364457 GTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTC--AAGATGGCATTTGATTC 364514 | | ||||| ||||| || || || | ||| | ||||| ||| | || || || Sbjct 715100 GCGTCGGTGTCCAGGGTCTTGCCGATGCTTTCCT--TGCTCTGCGCATGCCTTTCGAGTC 715157 Query 364515 GCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGAC 364574 ||||| ||||| | || || ||| |||||||||| || || || ||| || |||| Sbjct 715158 TCCTGAGGCTCGAGAGCTGAACAAGCAGATCTTTGAGACCATCTACCATGCTGCTCTGAC 715217 Query 364575 TGCTT-CGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTC 364633 ||||| |||| | |||| || |||| |||||||| | |||| || ||| Sbjct 715218 TGCTTCCGTG-CAGCTGGCCAAGGAGGAGGGTCCTTACTCTACCTTCAAGGGCTCTCCTG 715276 Query 364634 TTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACT 364693 || |||| | ||||||| || | ||||| || | ||| |||| | ||| ||| Sbjct 715277 CCTCTGAGGGTATTCTCCAGTTCGACATGTGGAACGTGAAGCCCTCTGATCTCTGGGACT 715336 Query 364694 GGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGC 364753 |||| | || | | || ||| |||||||||| |||||| || | || | Sbjct 715337 GGGAGTCTCTCAGGGAGCAGGTCAAGGAGCATGGTACCCGCAACAGTCTGCTGCTTGCCC 715396 Query 364754 CCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTA 364813 |||||||||| || ||| | |||||||| || ||||||||||||||||| || | | Sbjct 715397 CCATGCCCACTGCCAGCACTTCGCAGATCCTGGGTAACAACGAGTGCTTCGAGCCTTACA 715456 Query 364814 CAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACC 364873 | ||| | || || || || || | || || || | ||| ||||| | Sbjct 715457 CCTCCAACATCTACCAGCGTCGTGTCCTCGCTGGCGAGTTCCAGGTCGTTAACCCCTGGT 715516 Query 364874 TAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCG 364933 | |||||||||| ||| || |||||| || |||||||||| ||||| | Sbjct 715517 TGCTCAAGGATCTCGTCGATATGGGCCTGTGGTCGGATTCCATGAAGAACCGAATCATTG 715576 Query 364934 CCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACA 364993 | | || ||||| | |||||||| || | || | || | ||| || | |||| Sbjct 715577 CTGAGAACGGTTCCATCCAGAACATCCCCAACATCCCCGCTGAGGTCAAGGCTCTCTACA 715636 Query 364994 AAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTT 365053 | ||||| ||||| |||||| ||| || | | ||||| ||||| || ||||| | Sbjct 715637 AGACCGTGTGGGAGATTTCCCAGCGCCAGGTCGTCCAGATGGCAGCCGACCGAGGTGCCT 715696 Query 365054 TTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTA 365113 | || |||| |||||| | ||| | ||||| | || ||| | |||| | | Sbjct 715697 TCATTGATCAGTCCCAGTCTCTCAACATCCACATGAAGGACCCCACCATGGGCAAGATCA 715756 Query 365114 CATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 | |||||| || ||| ||||| |||||| ||||| || Sbjct 715757 CCAGCATGCACTTTGCCGGCTGGAAGCTCGGTCTGAAGACGGG 715799 >seq54 Length=1261221 Score = 91.5 bits (100), Expect = 4e-13 Identities = 146/209 (70%), Gaps = 3/209 (1%) Strand=Plus/Minus Query 22438 AATAAGGCAGATTGGGCGCTGAAATGGAT---GAACAATGAACGTTCATTCGCGGAACGT 22494 || ||||| || ||||| | | |||||| | |||| || ||| || || | ||| Sbjct 1145661 AAGAAGGCCGACTGGGCTATCAGATGGATCCAGGACAAGGACTCTTCCTTTGCTCAGCGT 1145602 Query 22495 CTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTT 22554 || |||| || |||| || || || || ||||| ||| || ||| | | ||||| Sbjct 1145601 CTCGTTGCCTTCGCTGCCGTCGAGGGTATCTTCTTCAGTGGTGCCTTTGCTTCCATCTTC 1145542 Query 22555 TGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGA 22614 ||||| || || |||| | ||||| ||||| || || || || ||| | || || Sbjct 1145541 TGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTGACCTTCTCCAACGAGCTCATCTCTCGT 1145482 Query 22615 GATGAGGGTCTTCATACCGATTTTGCGTG 22643 |||||||||||||| ||||| ||||| || Sbjct 1145481 GATGAGGGTCTTCACACCGACTTTGCCTG 1145453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303351879980546