Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04-
27] 103 sequences; 46,940,970 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq37 381 2e-100
seq54 91.5 4e-13
>seq37
Length=4018383
Score = 381 bits (422), Expect = 2e-100
Identities = 1171/1783 (66%), Gaps = 46/1783 (3%)
Strand=Plus/Plus
Query 363400 AAGACGATGGAGAAATCCTACCTATCTCGT-ATCAATGGTGATATTGTTGAACGCCCGCA 363458
||||| | ||| ||||||||| ||| || |||| | |||||||| ||||| ||
Sbjct 714037 AAGACTCTTGAGCGATCCTACCTC-CTCAAGATTGATGGCAAGATTGTTGAGCGCCCCCA 714095
Query 363459 GCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCGATTGA 363518
||| ||| | |||||||||||| | || ||| | | |||| | | ||
Sbjct 714096 GCACATGATCATGCGTGTTGCTGTCGGCATCTGGGGTGACAACATTGAGCGTGTCCTCGA 714155
Query 363519 AACATATAAGCTTCTAA-GTGCTCGTGTATTCACGCACGCCACGCCAACAATGTACAATG 363577
|| || || || | | || || | ||||| || ||| | || || | | |||||
Sbjct 714156 GACTTACAACCTCATGTCGAGCAAGT-TCTTCACCCATGCCTCCCCCACCCTCTTCAATG 714214
Query 363578 CTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCCA 363637
| || |||| | || ||| | || || ||||| ||| | | |||||||| || |
Sbjct 714215 CGGGTACTCCCCAGCCTCAGCTCTCCTCATGCTTCCTTGTCGACATGAAGGAGGACAGTA 714274
Query 363638 TCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAA 363697
| |||||||| | ||| || || |||| ||||| | |||||||||| || || || |
Sbjct 714275 TTGAGGGTATTTATGATACTCTCAAGACCTGTGCCATGATTTCCAAGATGGCTGGTGGTA 714334
Query 363698 TTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCGGCACAGGGGG 363755
||||| | | || | ||| | ||||| || | | ||||| ||| || ||
Sbjct 714335 TTGGTCTGAACG-TGCACCGAATCCGTGCCACTGG-CTCCTACATCGCCGGTACCAACGG 714392
Query 363756 ATACTCGAATGGGCTGGTTCCC--ATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTC 363813
||| || || || | ||| ||||||||||| || |||| ||||| | ||||||
Sbjct 714393 TACCTCCAACGG--TGTTACCCCTATGCTTCGTGTCTTCAACAACACTGCCCGATACGTC 714450
Query 363814 GACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCC 363873
|| |||||||| ||||| || || ||||| || || || ||||| || ||
Sbjct 714451 GATCAGGGTGGCAACAAGCGACCTGGTGCTTTTGCCATCTACCTTGAGCCCTGGCACGCA 714510
Query 363874 GATATTTTTGAGTTTCTTGAGCTCCGGAAAAAC-ACGGGAA--AAGAGGAATTGCGTGCA 363930
||| | |||||||| ||||| || || || ||| |||| || |||||| | || ||
Sbjct 714511 GATGTCTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAAGAGG---TCCGCGCT 714567
Query 363931 CGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGT 363990
|| || ||||| || || ||| || | || | || |||||||| || ||| | |
Sbjct 714568 CGCGACTTGTTCCTGGCTCTCTGGATTCCCGATCTCTTCATGAAGCGTGTCGAG--AAGA 714625
Query 363991 AAGA--ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTG 364048
| | | ||| | || | || || |||| ||||| ||||| |||| | ||||
Sbjct 714626 ACGGTGACTGGACTCTGATGTGTCCCAACGAGTGTCCCGGTCTCGCCGACTGCTACGGTG 714685
Query 364049 ACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTC 364108
| || | | ||||| ||||| |||||||| || || |||| ||| ||||| ||
Sbjct 714686 AGGAGTTCGAGGCTCTGTACGAGAAGTATGAGAAGGCCGGCAAGGGTCGCAAGACCATGA 714745
Query 364109 CCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATA 364168
|| |||||||| |||| ||||||| | || | |||| ||||| || | |||| |
Sbjct 714746 AGGCCCAGAAGCTCTGGTATGCCATCCTCGAGGCTCAGACCGAGACTGGTAACCCCTTCA 714805
Query 364169 TGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGC 364228
|| | ||||| ||| |||||||||||| ||||||| || |||| ||||| |||| ||
Sbjct 714806 TGCTCTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACCTGGGTACCATTC-GC 714864
Query 364229 AG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGT 364287
|| |||||| || || ||||| || || ||| || || || ||| ||| || |||
Sbjct 714865 AGCTCCAACCTGTGCACTGAGATCATCGAGTACTGTGCCCCTGATGAGGTTGCTGTCTGT 714924
Query 364288 AACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAGATG----GTACT--TTTGACCAC 364341
|||||||| || |||| ||||| | || | || ||| | || | |||| |
Sbjct 714925 AACCTTGCCTCTCTCGCCCTTCCCTCTTTCATCAACTATGACGAGGCCTGCTATGACTTC 714984
Query 364342 CAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGACAAG 364401
||| | || | || || || | || | |||| || ||| | | || || |
Sbjct 714985 CAGAAGCTGCACGAGGTCACACAGACTGTCGTTCGCAACCTGAACAGGATCATTGATGTG 715044
Query 364402 AATTATTATCCAATTCCTGAAGC-CG----AGCGTTCTAATATGCGTCATCGCCCGATTG 364456
|| | || || |||||||||| || ||| || ||||| || || || ||||
Sbjct 715045 AACCACTACCCCGTTCCTGAAGCTCGCAACAGC-----AACATGCGACACCGACCTATTG 715099
Query 364457 GTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTC--AAGATGGCATTTGATTC 364514
| | ||||| ||||| || || || | ||| | ||||| ||| | || || ||
Sbjct 715100 GCGTCGGTGTCCAGGGTCTTGCCGATGCTTTCCT--TGCTCTGCGCATGCCTTTCGAGTC 715157
Query 364515 GCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGAC 364574
||||| ||||| | || || ||| |||||||||| || || || ||| || ||||
Sbjct 715158 TCCTGAGGCTCGAGAGCTGAACAAGCAGATCTTTGAGACCATCTACCATGCTGCTCTGAC 715217
Query 364575 TGCTT-CGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTC 364633
||||| |||| | |||| || |||| |||||||| | |||| || |||
Sbjct 715218 TGCTTCCGTG-CAGCTGGCCAAGGAGGAGGGTCCTTACTCTACCTTCAAGGGCTCTCCTG 715276
Query 364634 TTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACT 364693
|| |||| | ||||||| || | ||||| || | ||| |||| | ||| |||
Sbjct 715277 CCTCTGAGGGTATTCTCCAGTTCGACATGTGGAACGTGAAGCCCTCTGATCTCTGGGACT 715336
Query 364694 GGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGC 364753
|||| | || | | || ||| |||||||||| |||||| || | || |
Sbjct 715337 GGGAGTCTCTCAGGGAGCAGGTCAAGGAGCATGGTACCCGCAACAGTCTGCTGCTTGCCC 715396
Query 364754 CCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTA 364813
|||||||||| || ||| | |||||||| || ||||||||||||||||| || | |
Sbjct 715397 CCATGCCCACTGCCAGCACTTCGCAGATCCTGGGTAACAACGAGTGCTTCGAGCCTTACA 715456
Query 364814 CAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACC 364873
| ||| | || || || || || | || || || | ||| ||||| |
Sbjct 715457 CCTCCAACATCTACCAGCGTCGTGTCCTCGCTGGCGAGTTCCAGGTCGTTAACCCCTGGT 715516
Query 364874 TAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCG 364933
| |||||||||| ||| || |||||| || |||||||||| ||||| |
Sbjct 715517 TGCTCAAGGATCTCGTCGATATGGGCCTGTGGTCGGATTCCATGAAGAACCGAATCATTG 715576
Query 364934 CCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACA 364993
| | || ||||| | |||||||| || | || | || | ||| || | ||||
Sbjct 715577 CTGAGAACGGTTCCATCCAGAACATCCCCAACATCCCCGCTGAGGTCAAGGCTCTCTACA 715636
Query 364994 AAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTT 365053
| ||||| ||||| |||||| ||| || | | ||||| ||||| || ||||| |
Sbjct 715637 AGACCGTGTGGGAGATTTCCCAGCGCCAGGTCGTCCAGATGGCAGCCGACCGAGGTGCCT 715696
Query 365054 TTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTA 365113
| || |||| |||||| | ||| | ||||| | || ||| | |||| | |
Sbjct 715697 TCATTGATCAGTCCCAGTCTCTCAACATCCACATGAAGGACCCCACCATGGGCAAGATCA 715756
Query 365114 CATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156
| |||||| || ||| ||||| |||||| ||||| ||
Sbjct 715757 CCAGCATGCACTTTGCCGGCTGGAAGCTCGGTCTGAAGACGGG 715799
>seq54
Length=1261221
Score = 91.5 bits (100), Expect = 4e-13
Identities = 146/209 (70%), Gaps = 3/209 (1%)
Strand=Plus/Minus
Query 22438 AATAAGGCAGATTGGGCGCTGAAATGGAT---GAACAATGAACGTTCATTCGCGGAACGT 22494
|| ||||| || ||||| | | |||||| | |||| || ||| || || | |||
Sbjct 1145661 AAGAAGGCCGACTGGGCTATCAGATGGATCCAGGACAAGGACTCTTCCTTTGCTCAGCGT 1145602
Query 22495 CTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTT 22554
|| |||| || |||| || || || || ||||| ||| || ||| | | |||||
Sbjct 1145601 CTCGTTGCCTTCGCTGCCGTCGAGGGTATCTTCTTCAGTGGTGCCTTTGCTTCCATCTTC 1145542
Query 22555 TGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGA 22614
||||| || || |||| | ||||| ||||| || || || || ||| | || ||
Sbjct 1145541 TGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTGACCTTCTCCAACGAGCTCATCTCTCGT 1145482
Query 22615 GATGAGGGTCTTCATACCGATTTTGCGTG 22643
|||||||||||||| ||||| ||||| ||
Sbjct 1145481 GATGAGGGTCTTCACACCGACTTTGCCTG 1145453
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303351879980546
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |