Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04-
27] 103 sequences; 46,940,970 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq32 95.1 1e-14
>seq32
Length=3227256
Score = 95.1 bits (104), Expect = 1e-14
Identities = 142/199 (71%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAA-ATCGATTACCAT-CGAAGTCGAGGCCA 24048
|||||| | || || || || | |||||||| | | || ||| | ||| || || |
Sbjct 1807857 ATGCAAATCTTCGTCAAGACTCTCACTGGAAAGAACCATCACCCTTCGAGGTGGAATCGT 1807798
Query 24049 ACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATC 24108
|||||| ||||| | || || |||||| || || ||||| || ||||| || |
Sbjct 1807797 CCGACACAATCGATAACGTGAAGTCGAAGATTCAGGATAAGGAAGGAATTCCTCCTGACC 1807738
Query 24109 AACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATA 24168
||||| |||| || | || ||||||||||||||| || | | ||| ||||||| || |
Sbjct 1807737 AACAGCGACTTATCTTCGCCGGCAAGCAACTCGAGGACGGCCGAACTCTCAGCGACTACA 1807678
Query 24169 ACATTCAAAAAGAATCTAC 24187
|||| || || || |||||
Sbjct 1807677 ACATCCAGAAGGAGTCTAC 1807659
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429935460295965
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |