Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04-
27] 103 sequences; 46,940,970 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq37 158 1e-33
seq32 111 1e-19
seq41 98.7 9e-16
seq4 86.0 6e-12
>seq37
Length=4018383
Score = 158 bits (174), Expect = 1e-33
Identities = 917/1450 (63%), Gaps = 55/1450 (4%)
Strand=Plus/Minus
Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117
|| |||||||| |||||||| || | ||||||||| || | ||| || ||| | ||
Sbjct 715508 TTAACGACCTGGAACTCGCCAGCGAGGACACGACGCTGGTAGATGTTGGAGGTGTAAGGC 715449
Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177
|| || ||||||| || |||||||| || | || | || ||||||||| || | |
Sbjct 715448 TCGAAGCACTCGTTGTTACCCAGGATCTGCGAAGTGCTGGCAGTGGGCATGGGGGCAAGC 715389
Query 145178 A--ATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCC 145235
| | | || ||||| || |||| ||||| | ||| | || | |||| ||||
Sbjct 715388 AGCAGACTG--TTGCGGGTACCATGCTCCTTGACCTGCTCCCTGAGAGACTCCCAGTCCC 715331
Query 145236 ATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGC 145295
| || || ||| |||||| |||||||||| |||| | ||| ||||| ||| ||
Sbjct 715330 AGAGATCAGAGGGCTTCACGTTCCACATGTCGAACTGGAGAATACCCTCAGAGGCAGGAG 715271
Query 145296 TGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCT---CGCAACTCGCCTCCA 145352
||| | |||| | |||| ||| ||||| |||| || || || ||
Sbjct 715270 AGCCCTTGAAGGTAGAGTAAGGACCCTCCTCCTTGGCCAGCTGCACGGAA---GCAGTCA 715214
Query 145353 GAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCT 145412
|||| | || || ||||| || ||| |||| ||| || ||| ||
Sbjct 715213 GAGCAGCATGGTAGATGGTCTCAAAGATCTGCTTGTTCAGCTCTCGAGCCTCAGGAGACT 715154
Query 145413 CGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGG 145472
|| | ||||||||||| | ||||||||||| || ||||| | || ||||| || |
Sbjct 715153 CGAAAGGCATGCGCAGAGCAAGGAAAGCATCGGCAAGACCCTGGACACCGACGCCAATAG 715094
Query 145473 GCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGATAA 145532
| || ||| ||||||||| | | || | || || | || || || |
Sbjct 715093 GTCGGTGTCGCATGTTGCTGTTGCGAGCTTCAGGAACGGGGTAGTGGTTCACATCAATGA 715034
Query 145533 TTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACC 145592
| | |||| ||| || || || || ||| | | ||| ||| | |||||| | |
Sbjct 715033 TCCTGTTCAGGTTGCGAACGACAGTCTGTGTGACCTCGTGCAGCTTCTGGAAGTCATAGC 714974
Query 145593 GAGCCTCGTCAACG---ACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTG 145649
||||||||| | | | | || | | ||||| || || | ||||| || |
Sbjct 714973 AGGCCTCGTCATAGTTGATGAAAGAGGGA---AGGGCGAGAGAGGCAAGGTTACAGACAG 714917
Query 145650 CCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGG 145709
| ||| || | | | | ||| | | |||||| | ||||| ||| | ||||
Sbjct 714916 CAACCTCATCAGGGGCACAGTACTCGATGATCTCAGTGCACAGGTTGGAGCTGCGAATGG 714857
Query 145710 TTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTC 145769
| ||||| || | ||| || || || | |||||| ||||||||||||||| | ||
Sbjct 714856 TACCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGT 714797
Query 145770 CGCCAGTCTCCACCTGCGTCTCCACGAT---AAAACGGTGCAAGTCCTGCGCACGCA--- 145823
|||||||| ||| | ||| | ||| | | | | || | ||| || ||
Sbjct 714796 TACCAGTCTCGGTCTGAGCCTCGAGGATGGCATACCAGAGC---TTCTGGGCCTTCATGG 714740
Query 145824 -CCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAA 145882
| ||| | | ||||| ||| | || ||| ||| || |||| ||| | |
Sbjct 714739 TCTTGCGACCCTTGCCGGCCTTCT----CATACTTCTCGTACAGAGCCTCGAACTCCTCA 714684
Query 145883 CCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTG 145942
|||||||| |||| || |||||||||| ||||||||||||||| | ||| | |||||
Sbjct 714683 CCGTAGCAGTCGGCGAGACCGGGACACTCGTTGGGACACATCAGAGTCCAGTCACCGTTC 714624
Query 145943 GCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCT 146002
| ||| |||| ||| || | ||| || | ||| || || | ||||||||| ||
Sbjct 714623 TTCTCGACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCCAGGAACAAGTCGCGAGC- 714565
Query 146003 TTGCAATCCTCAGC--ACCCATGTTTC--GCTTCAAATTAAGCACACT-ATAGATGTCCG 146057
|| |||| | || || ||| || || | ||| | ||| | ||| || |
Sbjct 714564 --GCGGACCTCTTCCTTGCCGTGGTTCTTGC-GCAGGTCAAGGA-ACTCAAAGACATCTG 714509
Query 146058 CGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCA 146114
||||||| || |||| |||| ||| | || || ||| ||||||||||| || |
Sbjct 714508 CGTGCCAGGGCTCAAGGTAGATGGCAAAAGCACCAGGTCGCTTGTTGCCACCCTGATCGA 714449
Query 146115 CGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGT 146174
||| || | ||||||| ||||| || | ||| || || ||| ||| ||||
Sbjct 714448 CGTATCGGGCAGTGTTGTTGAAGACACGAAGCATAGGGGTAACACCGTTGGAGGTACCGT 714389
Query 146175 TCGTAGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGC 146234
| ||| | || || ||| || || | | || || |||| || | ||| |
Sbjct 714388 TGGTACCGGCGATGTAGGAGCCAGTGGCACGGATTCGGTGCACGTTCAGACCAATACCAC 714329
Query 146235 C-GCCGTACTTGGATATAGCGGCGCAGTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTA 146293
| ||| | |||||| || ||| ||| ||| || || || || || ||||| ||
Sbjct 714328 CAGCCAT-CTTGGAAATCATGGCACAGGTCTTGAGAGTATCATAAATACCCTCAATACTG 714270
Query 146294 TC--GCTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCG 146351
|| |||| ||| ||| || ||||| ||| | | ||| | | || || |||||
Sbjct 714269 TCCTCCTTC--ATGTCGACAAGGAAGCATGAGGAGAGCTGAGGCTGGGGAGTACCCGCAT 714212
Query 146352 AGAACAACGTCGGGCTCGCGTGCGTAAACATTTTTCGGCTCATCATCCG---ATACGTTT 146408
||| | || ||| || || || || | || |||| ||| | || || |
Sbjct 714211 TGAAGAGGGTGGGGGAGGCATGGGTGAAGAACTT---GCTCGACATGAGGTTGTAAGTCT 714155
Query 146409 CGATAGCGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTT 146468
||| | | ||||| ||| || ||||| | ||| || ||||||| |||||| |
Sbjct 714154 CGAGGACACGCTCAATGTTGTCACCCCAGATGCCGACAGCAACACGCATGATCATGTGCT 714095
Query 146469 GGGGCCGCTC 146478
|||| |||||
Sbjct 714094 GGGGGCGCTC 714085
>seq32
Length=3227256
Score = 111 bits (122), Expect = 1e-19
Identities = 147/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
|||||| || | ||| || || | ||| | ||| |||||||| || ||||||||||||
Sbjct 1808068 GCCACCACGGAGACGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGA 1808127
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| |||||| ||||| ||||||||||| ||| | || | |||||||| || |||||
Sbjct 1808128 AAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGATCAGGAGG 1808187
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
||| || || ||||| || ||| ||||| | || | ||||| | |||||| |
Sbjct 1808188 GATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCGATGGTATCAGAGGACTCAAC 1808247
Query 131187 GTCGACGGTAACGGTTTTACCGGT 131210
|||| ||| | ||| || || ||
Sbjct 1808248 CTCGAGGGTGATGGTCTTGCCCGT 1808271
Score = 109 bits (120), Expect = 5e-19
Identities = 161/227 (71%), Gaps = 1/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| || || | ||| ||||| | || | |||||| ||||| ||||||||||| ||
Sbjct 1807402 CCGCCACGGAGACGGAGCACAAGGTGCAGGGTCGATTCCTTCTGAATGTTGTAGTCAGAG 1807461
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| |||||| |||||||| || || |||| | |||||||||| ||| |||
Sbjct 1807462 AGGGTGCGACCGTCCTCCAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGT-CGGGGGG 1807520
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| || || ||| | | || | |||||| |||||||||
Sbjct 1807521 ATACCCTCCTTGTCCTGAATCTTGGACTTCACATTATCAATGGTATCGCTGGACTCGACC 1807580
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | ||| || || || ||||| || || || ||||||||
Sbjct 1807581 TCCAGAGTGATGGTCTTTCCTGTGAGAGTCTTGACAAAGATCTGCAT 1807627
>seq41
Length=1307349
Score = 98.7 bits (108), Expect = 9e-16
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 131043 CTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTA 131102
|||||| || |||||||| ||||||| |||||| ||||| |||||||| || || |
Sbjct 954362 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTACCAGCAAA 954421
Query 131103 GATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTG 131162
||| | ||||||||||| || || || || || ||||| ||| || ||||| |
Sbjct 954422 GATAAGTCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTT 954481
Query 131163 CTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTAC 131222
|| | || |||| ||||| | || | ||| | || || || || || || || ||
Sbjct 954482 GTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTCCCCGTAAGGGTCTTGAC 954541
Query 131223 GAAAATCTGCAT 131234
||| ||||||||
Sbjct 954542 GAAGATCTGCAT 954553
>seq4
Length=1115785
Score = 86.0 bits (94), Expect = 6e-12
Identities = 128/182 (70%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104
|||| || |||||||| ||| | || || ||||| ||||||||||| ||| |||
Sbjct 972052 CCTTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCAAGCTGCTTGCCAGCGAAGA 972111
Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164
| | |||||||| ||||| || || || || ||||| ||| || ||||| | |
Sbjct 972112 TCAGTCGCTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 972171
Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
| | || || | |||||||| |||| ||| | ||| || || || || || || ||||
Sbjct 972172 CAATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 972231
Query 131225 AA 131226
||
Sbjct 972232 AA 972233
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472012192283520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |