Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04- 27] 103 sequences; 46,940,970 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq32 87.8 1e-12 >seq32 Length=3227256 Score = 87.8 bits (96), Expect = 1e-12 Identities = 142/203 (70%), Gaps = 1/203 (0%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 ||||| || || ||||| || ||||||||||| | | ||| ||||||||| || Sbjct 1807426 TGCAGGGTCGATTCCTTCTGAATGTTGTAGTCAGAGAGGGTGCGACCGTCCTCCAGCTGC 1807485 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 || || ||| | ||||| ||||| |||| | || | ||||| ||||| ||| | Sbjct 1807486 TTACCAGCAAAGATAAGTCGCTGCTGGT-CGGGGGGATACCCTCCTTGTCCTGAATCTTG 1807544 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||| | | | || |||| || ||| |||| |||||||| ||||| || Sbjct 1807545 GACTTCACATTATCAATGGTATCGCTGGACTCGACCTCCAGAGTGATGGTCTTTCCTGTG 1807604 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 || || |||||||| |||||||| Sbjct 1807605 AGAGTCTTGACAAAGATCTGCAT 1807627 Score = 86.0 bits (94), Expect = 5e-12 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||||| || |||||||| || |||||||||||| | ||| | ||||| Sbjct 1807644 AGAACCAGGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTGAGAGTTCGGCCGTCC 1807703 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || | ||| ||||| || | ||||| ||||||||||| ||| | || || || || Sbjct 1807704 TCGAGTTGCTTGCCGGCGAAGATAAGTCGCTGTTGGTCAGGAGGAATTCCTTCCTTATCC 1807763 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTC-CACGGTGATGGT 16902 ||| | | |||||| | | | |||||| | ||| || | ||||||||| Sbjct 1807764 TGAATCTTCGACTTCACGTTATCGATTGTGTCGGACGATTCCACCTCGAAGGGTGATGGT 1807823 Query 16903 T-TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | ||||| || || || ||||| || || ||||| Sbjct 1807824 TCTTTCCAGTGAGAGTCTTGACGAAGATTTGCAT 1807857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405087491487970