Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04- 27] 103 sequences; 46,940,970 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq32 113 4e-20 >seq32 Length=3227256 Score = 113 bits (124), Expect = 4e-20 Identities = 154/207 (74%), Gaps = 6/207 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAA-ATCCATCACAGT-CGAAGTGGAGTCGT 25056 |||||||| || || |||||| | || || || | ||||||| | ||| ||||| |||| Sbjct 1807857 ATGCAAATCTTCGTCAAGACTCTCACTGGAAAGAACCATCACCCTTCGAGGTGGAATCGT 1807798 Query 25057 CTGACACTATCGAGTCAC-TGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 | ||||| ||||| | || ||||| | || | ||| || || ||||| ||||| ||||| Sbjct 1807797 CCGACACAATCGA-TAACGTGAAGTCGAAGATTCAG-GATAAGGAAGGAATTCCTCCTGA 1807740 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||||||||| |||| || |||||||| ||| | || || | || ||| | |||| || Sbjct 1807739 CCAACAGCGACTTATCTTCGCCGGCAAGCAACTCGAGGACGGCCGAACTCTCAGCGACTA 1807680 Query 25175 CAATATTCAAAAAGAATCCACGCTACA 25201 ||| || || || || || || || || Sbjct 1807679 CAACATCCAGAAGGAGTCTACTCTGCA 1807653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327456037945