Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04-
27] 103 sequences; 46,940,970 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq32 113 4e-20
>seq32
Length=3227256
Score = 113 bits (124), Expect = 4e-20
Identities = 154/207 (74%), Gaps = 6/207 (3%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAA-ATCCATCACAGT-CGAAGTGGAGTCGT 25056
|||||||| || || |||||| | || || || | ||||||| | ||| ||||| ||||
Sbjct 1807857 ATGCAAATCTTCGTCAAGACTCTCACTGGAAAGAACCATCACCCTTCGAGGTGGAATCGT 1807798
Query 25057 CTGACACTATCGAGTCAC-TGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
| ||||| ||||| | || ||||| | || | ||| || || ||||| ||||| |||||
Sbjct 1807797 CCGACACAATCGA-TAACGTGAAGTCGAAGATTCAG-GATAAGGAAGGAATTCCTCCTGA 1807740
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
||||||||| |||| || |||||||| ||| | || || | || ||| | |||| ||
Sbjct 1807739 CCAACAGCGACTTATCTTCGCCGGCAAGCAACTCGAGGACGGCCGAACTCTCAGCGACTA 1807680
Query 25175 CAATATTCAAAAAGAATCCACGCTACA 25201
||| || || || || || || || ||
Sbjct 1807679 CAACATCCAGAAGGAGTCTACTCTGCA 1807653
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433327456037945
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |