Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04-
27] 103 sequences; 46,940,970 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq32 140 7e-28
seq43 111 3e-19
seq54 105 1e-17
>seq32
Length=3227256
Score = 140 bits (154), Expect = 7e-28
Identities = 436/668 (65%), Gaps = 9/668 (1%)
Strand=Plus/Plus
Query 279696 GTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTG 279755
|| || || ||||| ||||||||||||||||||||||| || | || ||||| || | |
Sbjct 1068853 GTCGGCTCCCTGTCTGGTGGTTGGAAGATGAAGCTGGCTCTGGCCCGAGCCATGCTTCAG 1068912
Query 279756 CGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCC 279815
|| || |||||||| || ||||| || || |||||||| | || | ||||| | ||
Sbjct 1068913 CGCGCTGATGTCCTTCTCCTTGACGAACCTACCAACCATCTTGATGTCGCCAACATCGCA 1068972
Query 279816 TGGCTAGTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGAC 279875
||||| | | |||||| | | || || | | || || || || |||||||||
Sbjct 1068973 TGGCTCGAGAACTACCTCAAGACTCATCCCGATATCACCTCTCTGATCGTGTCTCACGAC 1069032
Query 279876 TCTGGCTTCCTAGATGCCGTGTGCTCTGCCATCATTCACTATGAGCAAAATCTGAAGCTC 279935
||||| ||||| || || | ||| ||| ||||| |||| || |||||||
Sbjct 1069033 TCTGGTTTCCTCGACAATGTTACCACTGATATCTACCACTACGAGCCCAACAAGAAGCTC 1069092
Query 279936 TCCAAGCACATCGGCAACCTGTCTGCTTTCGTGGCAAAGCGCCCTGAGGCGGCCGCCTAC 279995
|| ||| || ||| || |||| || || | | || || ||||| ||||
Sbjct 1069093 GCCTGCTACAAAGGTAACTTGGCTGCCTTTGTCGAGATCCGACCCGAGGCCAAGAGCTAC 1069152
Query 279996 TATGACCTGAAGGACGCCACCGCCAAGTGGGAATTCCCTGAGCCAGGGTTTCTGGA-GGG 280054
|| |||| || | ||| || | ||| | |||||| || ||| ||| || ||
Sbjct 1069153 TACACCCTGTCGGCCTCCAACGTCCAGTTCAAGTTCCCTCCTCC-TGGTATCTTGACCGG 1069211
Query 280055 CATCACATCAAAGGATCGCGCAATCATGAAGCTCCGTGGCGTCTCCTTTGCTTATCCCAA 280114
||| || | | ||| || || || | | |||||| | | || |||||
Sbjct 1069212 TGTCAAGTCCATGACTCGTGCCATTATCCGCATGAGCAACGTCTCTTACACCTACCCCAA 1069271
Query 280115 TGGCCCCAA---CATC--TTCAGCAGTGTCAACTCGCAGGTTTCTATGAACTCACGGATT 280169
|||| ||| |||| | || || ||| | ||| | | || || || ||
Sbjct 1069272 -GGCCACAAAGCCATCCTTGCATGAG-GTCTCTTGCCAGCTGACCCTGTCGTCCCGTGTT 1069329
Query 280170 GGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAG 280229
| ||||||| ||||| || || || ||||| || || ||||| | || || ||||||
Sbjct 1069330 GCCATCATTGGCCCCAACGGAGCTGGCAAGTCGACTCTCATCAAGCTGCTTACCGGCGAG 1069389
Query 280230 ACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCT 280289
||| | ||| || ||| |||||| || ||| |||| || | ||| ||
Sbjct 1069390 ACCATTCCTACTACCGGAAAGGTTGAGAAGCACCCTAACTTGCGTATCGGCTACATCAAG 1069449
Query 280290 CAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAG 280349
||||||||| | | ||| | |||| || || || | |||||| ||||| ||| | |||
Sbjct 1069450 CAGCACGCTCTGGAGCACGTTGAGATGCATCTCGAGAAGACTCCCAACCAGTACCTCCAG 1069509
Query 280350 TGGCGCTA 280357
||||| ||
Sbjct 1069510 TGGCGTTA 1069517
>seq43
Length=2522723
Score = 111 bits (122), Expect = 3e-19
Identities = 166/233 (71%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 280160 CTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCT 280219
||| || |||| || || || ||||| ||||| || |||||||| || ||||| |||||
Sbjct 2119730 CTCTCGTATTGCCGTTATCGGTCCCAACGGTGCCGGCAAGTCTACTCTGATCAACGTCCT 2119789
Query 280220 GACTGGCGAGACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGC 280279
||||| ||| | |||| ||||| ||| |||| ||||| || || ||
Sbjct 2119790 CACTGGTGAGCTCATCCCCACCGAGGGTGAGATTTACCAGCACGAGAACATCCGTATCGC 2119849
Query 280280 TTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCA 280339
||| || |||||||||||| ||||| || ||||||||||||| |||||| | |
Sbjct 2119850 CTACATCAAGCAGCACGCTTTCGCTCACATTGATAACCACCTGGACAAGACTCCCTCCGA 2119909
Query 280340 ATACATTCAGTGGCGCTATGCA-AGTGGGCAGGATCTGGAGTCGGTGGATCGC 280391
||||| |||||||| | | || | ||| |||||| ||| | |||| |||
Sbjct 2119910 GTACATCCAGTGGCGAT-TCCAGACTGGTGAGGATCGTGAGACCATGGACCGC 2119961
Score = 96.9 bits (106), Expect = 7e-15
Identities = 156/222 (70%), Gaps = 2/222 (1%)
Strand=Plus/Plus
Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404
|| |||||||| || ||||| ||||| || || || |||| |||||||| || |||
Sbjct 2118915 GGCGAGGATCTCTGCAACTGTACCTTCTCTCTTGCCTACGGTGCCAAGATTCTTCTCAAC 2118974
Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464
|| | |||| ||||||| ||| | || || ||||| ||||||||| || |
Sbjct 2118975 CAGACTCACCTCCGTCTCAAGCGAGGCCAGCGTTACGGTCTTTGCGGTCCCAACGGTTCC 2119034
Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524
|| ||| |||||| ||||||||||| |||| ||| | | ||| ||||| | |||
Sbjct 2119035 GGAAAGTCCACTCTCATGCGCGCCATCAACAACGAGCAGGTCG-AGGGTTTCCCCAAGCA 2119093
Query 279525 -TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTC 279565
||||| | ||| || | || ||||||||| | |||||
Sbjct 2119094 GAGCGAGGTCAAGACTGTCTTCGTCGAGCACGACCTGGACTC 2119135
>seq54
Length=1261221
Score = 105 bits (116), Expect = 1e-17
Identities = 379/588 (64%), Gaps = 21/588 (4%)
Strand=Plus/Plus
Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622
|||||||| || | |||||| |||| ||||| ||||||||||||||||||||| |
Sbjct 1145186 TCGAAGAAGTTGGTCTTGCCACCCAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGCA 1145245
Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682
| ||||| ||| | ||| || || |||| || ||||| || || ||||| |
Sbjct 1145246 GACTTGTAGACCTTCTCGTTGCCCAGGGCGACGAGGAGACGGTCGGCGACGAACTCGATG 1145305
Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742
||||| ||| || | | ||||||||| | | || || | |||||| | |
Sbjct 1145306 TACTGCTTCATGAGGTTGGCGTTCATGCCGAGGAGGGCGCAGGGGAGAGCCTCAGTCAGG 1145365
Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCT---TCACCTG-TGCCAGAGA 251798
|| |||| || ||| || || || | || ||| | | ||| | | | |
Sbjct 1145366 AACTCCTGCTCAATGGTGACGGCATCAGTGATGATGTCCTGGATGATCTGCTTGCTGGCA 1145425
Query 251799 CAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTC 251858
| || || || | |||| ||||| | |||| | ||| |||||||| ||
Sbjct 1145426 CGGCC----CTTGAGGTGGGAGTGGAGGAGGCAGGCAAAGTCGGTGTGAAGACCCTCATC 1145481
Query 251859 GCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCA 251918
||| ||||| ||||||||| | ||| || ||||| | ||||| ||| |||||||
Sbjct 1145482 ACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCGGGCATGAGACCACGCTTCTTGAGCCA 1145541
Query 251919 GAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAAG 251978
|||||| | ||||| ||| ||| | | ||||||||| | | ||||| ||
Sbjct 1145542 GAAGATGGAAGCAAAGGCACCACTGAAGAAGATACCCTCGACGGCAGCGAAGGCAACGAG 1145601
Query 251979 GCGCTCAGCAAACGA------CTTGTCCTGCGACAAGAACTTCTG--TGCCCATGCTGCC 252030
|||| |||||| || ||||||||| || | |||| ||||| | |||
Sbjct 1145602 ACGCTGAGCAAAGGAAGAGTCCTTGTCCTG-GA----TCCATCTGATAGCCCAGTCGGCC 1145656
Query 252031 TTCTTTCCAACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGAGTTCCGCTCGGCATCG 252090
||||| | | ||||| || || || || | |||||| || | |||| | |
Sbjct 1145657 TTCTTGCGGATGCAAGGGATGGTCTCAATGGCGTTGAAGAGATAGGTTCGCTGAGAAGGC 1145716
Query 252091 TCCTCGATGAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGATG 252138
|||| |||| | |||| || || ||||| |||| || ||||||
Sbjct 1145717 TCCTTGATGTAGGTGTCAATGAGCAGGGAGTAGGTCTCGGAGTGGATG 1145764
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027835443576623
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