Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04- 27] 103 sequences; 46,940,970 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq32 96.9 3e-15 >seq32 Length=3227256 Score = 96.9 bits (106), Expect = 3e-15 Identities = 162/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | ||| | || | ||||| || || || |||||||| ||| Sbjct 1807626 ATACCACCACGCAGACGAAGAACCAGGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCG 1807685 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || | ||| || || || ||||| || || ||| |||| || ||||||||||| ||| Sbjct 1807686 CTGAGAGTTCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATAAGTCGCTGTTGGTCAGGA 1807745 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||| || || |||||| || | | || | ||||||| ||||| Sbjct 1807746 GGAATTCCTTCCTTATCCTGAATCTTCGACTTCACGTTATCGATTGTGTCGGACGATTCC 1807805 Query 114333 ACGTC-CACGGTCACCGTT-TTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | ||| || || || ||||| || || || || ||||| Sbjct 1807806 ACCTCGAAGGGTGATGGTTCTTTCCAGTGAGAGTCTTGACGAAGATTTGCAT 1807857 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/228 (69%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||||||||| || | | || | || | || ||||| || ||||||||||| || Sbjct 1807401 ACCGCCACGGAGACGGAGCACAAGGTGCAGGGTCGATTCCTTCTGAATGTTGTAGTCAGA 1807460 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 | || ||| || || || || |||||||| |||| || ||||| |||| ||| || Sbjct 1807461 GAGGGTGCGACCGTCCTCCAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGT-CGGGGG 1807519 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 || || || ||||| |||||| || | | |||| ||| ||| |||| ||||| Sbjct 1807520 GATACCCTCCTTGTCCTGAATCTTGGACTTCACATTATCAATGGTATCGCTGGACTCGAC 1807579 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 |||| || | || || || || ||||| || ||||| |||||||| Sbjct 1807580 CTCCAGAGTGATGGTCTTTCCTGTGAGAGTCTTGACAAAGATCTGCAT 1807627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420133872600036