Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04-
27] 103 sequences; 46,940,970 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq54 416 5e-111
seq37 414 2e-110
>seq54
Length=1261221
Score = 416 bits (460), Expect = 5e-111
Identities = 616/858 (72%), Gaps = 24/858 (3%)
Strand=Plus/Minus
Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359
|||||| |||||||||||||| || ||| |||||| |||||||||||||| |||
Sbjct 1146009 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCCGAGGAGATTGATCTG 1145950
Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGA----GAACGAAAAGTTTTTCCTCAA 42415
||||||| || || ||| || | |||| |||| |||| ||| ||
Sbjct 1145949 TCCAAGGATCTCCACGACT-GGAACAACCGCCTGACCTCTGACGAGCAGTTCTTCATCTC 1145891
Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475
|||| || |||||||||||||||||||||||||| ||||| ||||| || | |
Sbjct 1145890 TCACATCCTTGCCTTCTTCGCCGCCTCTGACGGCATCGTCAACGAGAATCTTGTTGAGCG 1145831
Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535
|||| ||||| ||| | ||||| || |||||||||||||||||||| ||
Sbjct 1145830 ATTCAGCGGCGAGGTTCAGATCCCCGAGGCTCGATGCTTCTACGGCTTCCAGATCATGAT 1145771
Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCC 42592
|||||| | ||||| ||| ||| || ||||||| |||| |||||| ||| ||
Sbjct 1145770 GGAGAACATCCACTCCGAGACCTACTCC---CTGCTCATTGACACCTACATCAAGGAGCC 1145714
Query 42593 CGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGC 42652
|||| | | || ||||| ||||| ||||| || || |||||| ||||||||
Sbjct 1145713 TTCTCAGCGAACCTATCTCTTCAACGCCATTGAGACCATCCCTTGCATCCGCAAGAAGGC 1145654
Query 42653 GGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGC 42712
|||||||| ||| |||||| || ||| | | || | || | || || ||
Sbjct 1145653 CGACTGGGCTATCAGATGGATCCAGGACAAGGACTCTTCCTTTGCTCAGCGTCTCGTTGC 1145594
Query 42713 CTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAA 42772
||| | ||||||||||| ||||||||| || ||||| || |||||||||||||||||
Sbjct 1145593 CTTCGCTGCCGTCGAGGGTATCTTCTTCAGTGGTGCCTTTGCTTCCATCTTCTGGCTCAA 1145534
Query 42773 GCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGG 42831
| || ||| || |||||||| || |||||||| ||||| |||||| | || ||||
Sbjct 1145533 GAAGCGTGGTCTC-ATGCCCGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTGATGAGG 1145475
Query 42832 GGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTC-AGGCACAAGCCCTCG 42890
| || || | ||||||||||||||||| ||| ||||||| ||| | ||| |
Sbjct 1145474 GTCTTCACACCGACTTTGCCTGCCTCCTCCACTC---CCACCTCAAGGGCCGTGCCAGC- 1145419
Query 42891 AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACG 42950
||| || ||| || ||||||||| || ||||| || ||| |||||||||| ||
Sbjct 1145418 AAGCAGATCATCCAGGACATCATCACTGATGCCGTCACCATTGAGCAGGAGTTCCTGACT 1145359
Query 42951 CAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAG 43010
|| | || ||| |||| ||||||||||| | |||||||| |||||||| ||
Sbjct 1145358 GAGGCTCTCCCCTGCGCCCTCCTCGGCATGAACGCCAACCTCATGAAGCAGTACATCGAG 1145299
Query 43011 TACGTCGCCGACCATCTCCT-GT-GCCAGATGGGTCTC-AGCCGCCTCTACAACACGCCG 43067
| ||||||||||| |||||| || ||| |||| | || | ||||||| | |
Sbjct 1145298 TTCGTCGCCGACCGTCTCCTCGTCGCC--CTGGGCAACGAGAAG-GTCTACAAGTCTGCC 1145242
Query 43068 TGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAG 43127
|||||||||||| |||||||||||||| ||| |||||||||||||| |||||||||
Sbjct 1145241 AACCCCTTCGACTTCATGGAGAACATCTCCCTGGGTGGCAAGACCAACTTCTTCGAGAAG 1145182
Query 43128 CGCGTCGCCGACTACCAG 43145
|| |||| |||||||||
Sbjct 1145181 CGTGTCGGTGACTACCAG 1145164
>seq37
Length=4018383
Score = 414 bits (458), Expect = 2e-110
Identities = 1229/1874 (66%), Gaps = 71/1874 (4%)
Strand=Plus/Minus
Query 243741 TGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTC 243800
||||||| | ||| || |||| |||| || | ||||||||||||||| ||||| || |
Sbjct 715846 TGAACTGAATGGGAGCAGCGGCAGCCTGCGTTCGCAGGTAGTACATGCCCGTCTTCAGAC 715787
Query 243801 CACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGT 243860
| |||| || | ||||||| || | ||| ||| || | ||
Sbjct 715786 CGAGCTTCCAGCCGGCAAAGTGCATGCTGGTGATCTTGCCCATGGTGGG---------GT 715736
Query 243861 CCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGG 243920
||| || || |||||| |||||| ||| || | ||||| | || || || |
Sbjct 715735 CCTT---CATGTGGATGTTGAGAGACTGGGACTGATCAATGAAGGCACCTCGGTCGGCTG 715679
Query 243921 CCATGGTGATGAGGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGT 243980
|||| || || | ||| || ||||| || | |||||||||| | ||||| |
Sbjct 715678 CCATCTGGACGACCTGGCGCTGGGAAATCTCCCACACGGTCTTGTAGAGAGCCTTGACCT 715619
Query 243981 GCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGCA 244040
|||||| ||||||||| | || || || | | |||| || | ||
Sbjct 715618 CAGCGGGGATGTTGGGGATGTTCTGGATGGAACCGTTCTCAGCAATGATTCGGTTCTTCA 715559
Query 244041 TGTTATCGTTCCACAGGCCCA-AGCGCTCCAGCGCCTCGA----CCAGGTGCCTGTTCAC 244095
|| ||| ||||||||||| | || | || ||| || ||||| | || ||
Sbjct 715558 TGGAATCCGACCACAGGCCCATATCGA-CGAGATCCTTGAGCAACCAGGGG----TTAAC 715504
Query 244096 CACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGAT 244155
||||| ||||| || | || || || |||||||||| |||| | || |||||||
Sbjct 715503 GACCTGGAACTCGCCAGCGAGGACACGACGCTGGTAGATGTTGGAGGTGTAAGGCTCGAA 715444
Query 244156 GCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAG 244215
|| ||| |||| ||||| ||||||| ||||| ||||| |||||||| | | ||||||
Sbjct 715443 GCACTCGTTGTTACCCAGGATCTGCGAAGTGCTGGCAGTGGGCATGGGGGCAAGCAGCAG 715384
Query 244216 ACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCC 244275
|||||| | || ||| || || | ||||| | ||||||||| | |
Sbjct 715383 ACTGTTGCGGGTACCATGCTCCTTGACCTGCTCCCTGAGAGACTCCCAGTCCCAGAGATC 715324
Query 244276 CGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGG 244335
||||| | || |||| ||||||||| ||||| || | |||| | | ||
Sbjct 715323 --AGAGGGCTTCACGTT-------CCACATGTCGAACTGGAGAATACCCTCAGAGGCAGG 715273
Query 244336 GCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTT-ACAGCTCTCGTCGA 244394
||||| | |||| | ||| ||||| || || |||||||| || | ||| |
Sbjct 715272 AGAGCCCTTGAAGGTAGAGTAAGGACCCTCCTCCTTGGCCAGCTGCACGGAAGCAGTC-A 715214
Query 244395 GGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGG 244454
| || || | |||||||||||| |||||| |||||||| || || |||| | | ||
Sbjct 715213 GAGCAGCATGGTAGATGGTCTCAAAGATCTGCTTGTTCAGCTCTCGAGCCT--CAGGAGA 715156
Query 244455 T--GAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGAT 244512
||| || |||| || | ||| | ||||| || ||||| || |||| ||| ||
Sbjct 715155 CTCGAAAGGCATGCGCAGAGCAAGGAAAGCATCGGCAAGACCCTGGACACCGACGCCAAT 715096
Query 244513 GGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGAT 244572
|||| ||||||| ||||| | ||||| || |||||||| ||| | || ||
Sbjct 715095 AGGTCGGTGTCGCATGTTGCTGTTGCGAGCTTCAGGAACGGGGTAGTGGTTCACATCAAT 715036
Query 244573 CACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTA 244632
| | |||| |||||||| || | | ||| ||| |||| ||| ||||| ||
Sbjct 715035 GATCCTGTTCAGGTTGCGAACGACAGTCTGTGTGACCTCGTGCAGCTTCTGGAAGTCATA 714976
Query 244633 CTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAG 244692
| ||| ||||| | | |||| || | ||||||| ||| ||
Sbjct 714975 ---GCAGG---CCTCGTCATAGTTGATG------AAAGAGGGAAGGGCGAGAGAGGCAAG 714928
Query 244693 GTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACT 244752
||| ||||| || ||||| || | | ||||| || ||||| ||||| |||||
Sbjct 714927 GTTACAGACAGCAACCTCATCAGGGGCACAGTACTCGATGATCTCAGTGCACAGGTTGGA 714868
Query 244753 GCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAG 244812
|| ||||| ||||||| || || ||| |||| ||||||| |||||||||||
Sbjct 714867 GCTGCGAATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAG 714808
Query 244813 CATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGC 244872
||||||||| || |||||| ||| || |||||| | | |||||| | | ||
Sbjct 714807 CATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCGAGGATGGCATACCAGAGCTTCTGGGC 714748
Query 244873 CTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTC 244932
||| | ||| ||||| ||||||| | ||| || |||||| |||||||||||
Sbjct 714747 CTTCATGGTCTTGCGACCCTTGCCGGCCTTCTCATACTTCTCGTACAGAGCCTCGAACTC 714688
Query 244933 GGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGG-CACATGAGACTCCACTCGC 244991
|| || ||| | || ||||| ||| || ||| ||||| ||| |||| || |
Sbjct 714687 CTCACCGTAGCAGTCGGCGAGACCGGGACACT-CGTTGGGACACATCAGAGTCCAGTCAC 714629
Query 244992 CGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCC 245051
|| | || ||| | || ||||||||| ||||| |||||||| ||| |||| | ||| |
Sbjct 714628 CGTTCTTCTCGACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCCAGGAACAAGTCGC 714569
Query 245052 TGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGA 245111
| | ||| ||| ||| |||||| | ||| || | || |||||||| ||
Sbjct 714568 GAGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCTG 714509
Query 245112 CGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCA 245171
||||||||||||| | ||||| || | || || || ||||||||||| ||||| || |
Sbjct 714508 CGTGCCAGGGCTCAAGGTAGATGGCAAAAGCACCAGGTCGCTTGTTGCCACCCTGATCGA 714449
Query 245172 CCATCCTCTCGAGC----GCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGG 245227
| | ||| || |||||||| || || |||| | ||||| |||
Sbjct 714448 ----CGTATCGGGCAGTGTTGTTGAAGACACGAAGCATAGGGGTAACACCGTTGGAGGTA 714393
Query 245228 CCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTG-ATGGACATGCCTAG 245286
|||||||| || |||||||| ||| || | | || | | || | | || || |
Sbjct 714392 CCGTTGGTACCGGCGATGTAGGAGCCAGTGGCACGGA-TTCGGTGCACGTTCAGACCAAT 714334
Query 245287 TCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCAT 245346
|| || || |||||| || | ||| ||| |||||| || || || ||||| ||
Sbjct 714333 ACCACCAGCCATCTTGGAAATCATGGCACAGGTCTTGAGAGTATCATAAATACCCTCAAT 714274
Query 245347 GCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGA 245406
|||||| |||||||| || || ||||| ||||| ||||| |||| ||| | | ||
Sbjct 714273 ACTGTCCTCCTTCATGTCGACAAGGAAGCATGAGGAGAGCTGAGGCTGGGGAGTACCCGC 714214
Query 245407 GTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGAACCCGTACGTCTG 245466
||||| || |||||| ||| ||||| ||| | |||||| | || ||| ||||
Sbjct 714213 ATTGAAGAGGGTGGGGGAGGCATGGGTGAAGAACTTGCTCGACATGAGGTTGTAAGTCTC 714154
Query 245467 GAGCAGAGCGTCGATGTTGTCGCCGTGGATCTGCAGGGCGCA--CCTCATGAGGGTGTGC 245524
||| | | || |||||||| || || ||| | ||| | ||||| |||||
Sbjct 714153 GAGGACACGCTCAATGTTGTCACCCCAGA--TGCCGACAGCAACACGCATGATCATGTGC 714096
Query 245525 T-GGGGCG-TC-TCGATGGGTCCCTCGGGTCCCTTGAGCATGTAGGAGCGCTCGAGCGTC 245581
| |||||| || | || || || |||||| | |||||| ||||| || |||
Sbjct 714095 TGGGGGCGCTCAACAATCTTGCCATC---AATCTTGAGGAGGTAGGATCGCTCAAGAGTC 714039
Query 245582 TTGAACCCAAAGTA 245595
||||| ||||||||
Sbjct 714038 TTGAAGCCAAAGTA 714025
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944337984163280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |