Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04-
27] 103 sequences; 46,940,970 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq37 212 7e-50
seq54 181 1e-40
>seq37
Length=4018383
Score = 212 bits (234), Expect = 7e-50
Identities = 891/1387 (64%), Gaps = 60/1387 (4%)
Strand=Plus/Minus
Query 113565 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 113624
||||||||||||| || |||| | ||| ||||||||||| |||||||| || |
Sbjct 715846 TGAACTGAATGGGAGCAGCGGCAGCCTGCGTTCGCAGGTAGTACATGCCCGTCTTCAGAC 715787
Query 113625 CCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATGA 113684
| |||||||| | | ||||| || | |||| | || || | ||||
Sbjct 715786 CGAGCTTCCAGCCGGCAAAGTGCATGCTGGTGATCTTGCCCATGGTGGGGTCCTTCATGT 715727
Query 113685 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATCA 113744
|| ||| | | ||||| ||||| |||||| || || || || ||||| | | |
Sbjct 715726 GGATGTTGAGAGACTGGGACTGATCAATGAAGGCACCTCGGTCGGCTGCCATCTGGACGA 715667
Query 113745 CATCCTTCATCTTG---ATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGA 113801
| || || | || |||||||| || ||||||| ||| | ||| | ||||
Sbjct 715666 C---CTGGCGCTGGGAAATCTCCCACACGGTCTTGTAGAGAGCCTTGACCTCAGCGGGGA 715610
Query 113802 TATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGA---GATCCTTCAT---AT 113855
| | ||| || |||||||| ||| || | |||| | | |||||| ||
Sbjct 715609 TGTTGGGGATGTTCTGGATGGA---ACCGTTCTCAGCAATGATTCGGTTCTTCATGGAAT 715553
Query 113856 CCTTTGACCAGAGACCAATCTTTTTGAGATCCT----CCACGAGATGCTTATTGACAACA 113911
|| ||||| || || || | |||||||| | || || | || || ||
Sbjct 715552 CC---GACCACAGGCCCATATCGACGAGATCCTTGAGCAACCAGGGG----TTAACGACC 715500
Query 113912 ACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCAC 113971
||||| || |||||| || | | | ||||| |||| ||||| ||||| ||||||
Sbjct 715499 TGGAACTCGCCAGCGAGGACACGACGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCAC 715440
Query 113972 TCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTG 114031
|| |||||||||| ||| || | ||| ||| ||||||||||| || | || || |||
Sbjct 715439 TCGTTGTTACCCAGGATCTGCGAAGTGCTGGCAGTGGGCATGGGGGCAAGCAGCAGACTG 715380
Query 114032 TTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGC-TT 114090
|| ||| ||| | ||| | | | ||| |||| | |||||||| || || |
Sbjct 715379 TTGCGGGTACCATGCTCCTTGACCTGCTCCCTGAGAGACTCCCAGTCCCAG-AGATCAGA 715321
Query 114091 TGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAA 114150
| || | | | |||||| || |||||||| ||||| | ||||| || || |||| ||
Sbjct 715320 GGGCTTCACGTTCCACATGTCGAACTGGAGAATACCCTCAGAGGCAGGAGAGCCCTTGAA 715261
Query 114151 TGTCTCGTATGGGCCCTCAACCTCCGCCAATT---CGGAGCTCGCCTCGAGGGCTGCGTG 114207
|| ||| || ||||| ||| |||| | |||| || || || || ||
Sbjct 715260 GGTAGAGTAAGGACCCTCCTCCTTGGCCAGCTGCACGGA---AGCAGTCAGAGCAGCATG 715204
Query 114208 ATACATTGTCTCAAAAATGCGAGCATTCATTGC-CTTG-GCCTCGTCGGAATCAAACGCG 114265
|| || |||||||| || | |||| || || | ||||| || || || | |
Sbjct 715203 GTAGATGGTCTCAAAGATCTGCTTGTTCA--GCTCTCGAGCCTCAGGAGACTCGAAAG-G 715147
Query 114266 AGTCGGCACA-AAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATG 114324
| ||| | || || |||| || ||||| |||||||||| |||||| || || ||
Sbjct 715146 CATGCGCAGAGCAAGGAAAGCATCGGCAAGACCCTGGACACCGACGCCAATAGGTCGGTG 715087
Query 114325 TCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATT 114384
|| ||| || || ||||| ||||| || ||| ||| || | ||| ||
Sbjct 715086 TCGCATGTTGCTGTTGCGAGCTTCAGGAACGGGGTAGTGGTTCACATCAATGATCCTGTT 715027
Query 114385 TAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGT 114444
|| || |||| || ||||| || || ||||| | | | ||| | || |
Sbjct 715026 CAGGTTGCGAACGACAGTCTGTGTGACCTCGTGCAGCTTCTGGAAGTCATA---GCAGGC 714970
Query 114445 CTCTTCA---TTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTC 114501
||| ||| |||| | |||||||||| || || || ||||| |||| |||
Sbjct 714969 CTCGTCATAGTTGATGAAAGAGGGAAGGGCGAGAGAGGCAAGGTTACAGACAGCAACCTC 714910
Query 114502 ATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAA 114561
||| || |||||| || || || || |||| || || || |||||| ||||
Sbjct 714909 ATCAGGGGCACAGTACTCGATGATCTCAGTGCACAGGTTGGAGCTGCGAATGGTACCCAG 714850
Query 114562 GTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGT 114621
|||||| || || ||| ||| || ||||||||| |||||| | || | || ||
Sbjct 714849 GTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTACCAGT 714790
Query 114622 CTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGG 114680
||| || || | || ||| || || | ||||| | || | ||| || ||| |||
Sbjct 714789 CTCGGTCTGAGCCTCGAGGATGGCATACCAGAGCTTCTG-GGCCTTCA---TGGTCTTG- 714735
Query 114681 CTCGCCCCT------CCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGG 114734
|| |||| ||| ||| ||||| ||| || || || ||||| ||||| |
Sbjct 714734 --CGACCCTTGCCGGCCTTCTCATACTTCTCGTACAGAGCCTCGAACTCCTCACCGTAGC 714677
Query 114735 CCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAA 114794
|| | ||| || || || | || || | |||| ||| | ||| || ||| |
Sbjct 714676 AGTCGGCGAGACCGGGACACTCGTTGGGACACATCAGAGTCCAGTCACCGTTCTTCTCGA 714617
Query 114795 CACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTT 114854
|||||||||||||||| || || ||||||||||| ||| | || ||| ||| | |
Sbjct 714616 CACGCTTCATGAAGAGATCGGGAATCCAGAGAGCCAGGAACAAGTCGCGAGCGCGGACCT 714557
Query 114855 CTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTT 114914
|||| | || || || |||| || | || || | || ||| |||||||| || |
Sbjct 714556 CTTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCT 714497
Query 114915 CCAGGTA 114921
| |||||
Sbjct 714496 CAAGGTA 714490
>seq54
Length=1261221
Score = 181 bits (200), Expect = 1e-40
Identities = 539/818 (66%), Gaps = 25/818 (3%)
Strand=Plus/Plus
Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817
|||||| || || ||||||||||||||||| ||||| || ||| | ||| ||||||||
Sbjct 1145167 GTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCCAGGGAGATGTTCTCCAT 1145226
Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGCACCCCAATCTGTTTGAGG 125872
|| || || ||||| || || | | | |||| |||| | ||||
Sbjct 1145227 GAAGTCGAAGGGGTTGGCAGACTTGTAGACCTTCTCGTTG----CCCAGGGCGAC-GAGG 1145281
Query 125873 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGG 125932
||||| || | |||| |||| ||||||| ||| | | |||||| |||| ||||
Sbjct 1145282 AGACGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTTGGCGTTCATGCCGAGGAGG 1145341
Query 125933 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATG 125992
|| ||||| || || | |||| ||| |||||| ||||| || | ||||
Sbjct 1145342 GCGCAGGGGAGAGCCTCAGTCAGGAACTCCTGCTCAATGGTGACGGCATCAGTGATGATG 1145401
Query 125993 GCGTGAATGGTGTCCACCC---CAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCA 126049
| || ||| | | | | || | | ||| | | | || ||| || ||||
Sbjct 1145402 TCCTGGATGATCTGCTTGCTGGCACGGCCCTTGAGGTGGGAGTGGAGGAGG--CA-GGCA 1145458
Query 126050 AACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGC 126109
|| || ||| |||||||| ||||| |||||||| || || |||||| ||| || |||
Sbjct 1145459 AAGTCGGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCGGGC 1145518
Query 126110 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCC 126169
|||||||| |||||||| | |||||| || | | ||| | ||| ||||||||| |||
Sbjct 1145519 ATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCACCACTGAAGAAGATACCC 1145578
Query 126170 TCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGT-GTCAAACCA 126228
|| || ||||| |||| |||||||| ||||||||| | | | |||| | | |||
Sbjct 1145579 TCGACGGCAGCGAAGGCAACGAGACGCTGAGCAAAGGA-AGAGTCCTTGTCCTGGATCCA 1145637
Query 126229 CTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAG 126288
| || ||||| | ||||| || ||| || |||| ||||| || || | |||||
Sbjct 1145638 TCTGATAGCCCAGTCGGCCTTCTTGCGGATGCAAGGGATGGTCTCAATGGCGTTGAAGAG 1145697
Query 126289 TTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCC 126348
| | | || || || |||||||| | || ||||| || || || |||
Sbjct 1145698 ATAGGTTCGCTGAGAAGGCTCCTTGATGTAGGTGTCAATGAGCAGGGAGTAGGTCTCGGA 1145757
Query 126349 GTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTA 126407
||||| | | ||| || | ||| | ||||||| | || || ||| ||||| |
Sbjct 1145758 GTGGATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCATCGAGCCTCGGGGATCTGAA 1145816
Query 126408 CCTCATCGGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAA 126466
|||| | || ||| | | | | |||||| || || || || || | || ||
Sbjct 1145817 CCTC-GCCGCTGAATCGCTCAACAAGATTCTCGTTGACGATGCCGTCAGAGGCGGCGAAG 1145875
Query 126467 AACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCG 126523
|| || ||||| | ||||| ||| || | | ||| || | |||||||||
Sbjct 1145876 AAGGCAAGGATGTGAGAGATGAAGAACTGCTCGTCAGAGGTCAGGCGGTTGTTCCAGTCG 1145935
Query 126524 TCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561
| |||||||| || ||||| | |||||| ||||||||
Sbjct 1145936 TGGAGATCCTTGGACAGATCAATCTCCTCGGCAGTCCA 1145973
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597352830907240
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