Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04-
27] 103 sequences; 46,940,970 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq37 333 3e-86
>seq37
Length=4018383
Score = 333 bits (368), Expect = 3e-86
Identities = 1108/1710 (65%), Gaps = 44/1710 (3%)
Strand=Plus/Plus
Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777
||| | ||||||| |||||| ||||| ||| || |||||||||||||| ||||||| |
Sbjct 714019 TACCAATACTTTGGCTTCAAGACTCTTGAGCGATCCTACCTCCTCAAGATTGATGGCAAG 714078
Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837
|| ||||| || || || || | ||||| || || |||| || || || ||
Sbjct 714079 ATTGTTGAGCGCCCCCAGCACATGATCATGCGTGTTGCTGTCGGCATCTGGGGTGACAAC 714138
Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCACC 93897
|| | ||| | | ||| || |||| | |||| | ||| ||| ||
Sbjct 714139 ATTGAGCGTGTCCTCGAGACTTACAACCTCATGTCGAGCAAGTTCTTCACCCATGCCTCC 714198
Query 93898 CCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT-GAC 93956
|| ||||| ||||| ||||| || || ||| ||| | || || || ||||| | |||
Sbjct 714199 CCCACCCTCTTCAATGCGGGTACTCCCCAGCCTCAGCTCTCCTCATGCTTCCTTGTCGAC 714258
Query 93957 GAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTC 94016
| |||| ||| || || |||| || | |||||| |||||| | || ||
Sbjct 714259 -ATGAAGGAGGACAGTATTGAGGGTATTTATGATACTCTCAAGACCTGTGCCATGATTTC 714317
Query 94017 AAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACAT 94076
|| || || || || || | | || ||| | ||||||| || ||||||||
Sbjct 714318 CAAGATGGCTGGTGGTATTGGTCTGAACGTGCACCGAATCCGTGCCACTGGCTCCTACAT 714377
Query 94077 CCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGC 94136
| ||||||||| || ||||||||||| | ||||||||| || |||||||||||| |
Sbjct 714378 CGCCGGTACCAACGGTACCTCCAACGGTGTTACCCCTATGCTTCGTGTCTTCAACAACAC 714437
Query 94137 GGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGA 94196
|| || ||||| || |||||||| | | | ||| |||| || |||| || ||
Sbjct 714438 TGCCCGATACGTCGATCAGGGTGGCAACAAGCGACCTGGTGCTTTTGCCATCTACCTTGA 714497
Query 94197 GCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCT 94256
|||||||||||| || || | ||| | |||||||| |||||||||||||| ||
Sbjct 714498 GCCCTGGCACGCAGATGTCTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAAGA 714557
Query 94257 GGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGT 94316
|| | || | ||| | ||| ||||||||| | || || || || ||||| || ||
Sbjct 714558 GGTCCGCGCTCGCGACTTGTTCCTGGCTCTCTGGATTCCCGATCTCTTCATGAAGCGTGT 714617
Query 94317 CGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGT 94376
|||||| ||| | ||||| ||| | |||||||| || |||||||| || |||||
Sbjct 714618 CGAGAAGAACGGTGACTGGACTCTGATGTGTCCCAACGAGTGTCCCGGTCTCGCCGAC-- 714675
Query 94377 TTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGGAA 94436
|| || ||| || || | |||| ||||| | | | |||||| | ||
Sbjct 714676 ---TGCTACG----GTGAGGAGTTCGAGGCTCTGTACGAGAAGTATGAGAAGGCCGGCAA 714728
Query 94437 GGTT---------ATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGA 94487
|| | ||| | || |||||| ||| || ||| | || | ||| ||
Sbjct 714729 GGGTCGCAAGACCATGAAGGCCCAGAAGCTCTGGTATGCCATCCTCGAGGCTCAGACCGA 714788
Query 94488 GACGGGTACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGC 94546
||| |||| |||| ||| | | |||||| | ||| |||| |||| ||||||| ||
Sbjct 714789 GACTGGTAACCCCTTCATGCTCTACAAGGATCACTG-CAACCGCAAGAGCAACCAGAAGA 714847
Query 94547 ACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGG 94606
|||| || || ||||| || |||||||| ||||| ||||||| | | || |
Sbjct 714848 ACCTGGGTACCATTCGCAGCTCCAACCTGTGCACTGAGATCATCGAGTACTGTGCCCCTG 714907
Query 94607 ACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCT 94666
| ||| ||||||| |||||||| | ||| || ||| || ||||| | ||| |
Sbjct 714908 ATGAGGTTGCTGTCTGTAACCTTGCCTCTCTCGCCCTTCCCTCTTTCATCAACTATGACG 714967
Query 94667 ACACGT-CTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTC 94725
| | | ||| |||| | ||| | ||| || | | | | | | ||
Sbjct 714968 AGGCCTGCTATGACTTC-CAGAAGCTGCACGAG---GTCA----CACAG--ACTGTCGTT 715017
Query 94726 TTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCA 94785
|||||||||||| | || || |||| ||||||||| || || || |||
Sbjct 715018 CGCAACCTGAACAGGATCATTGATGTGAACCACTACCCCGTTCCTGAAGCTCGCAACAGC 715077
Query 94786 AACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATG 94845
||| || || || || || ||| |||| ||||||||| | || || || | |
Sbjct 715078 AACATGCGACACCGACCTATTGGCGTCGGTGTCCAGGGTCTTGCCGATGCTTTCCTTGCT 715137
Query 94846 ATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGC 94905
|||| |||| | ||| ||| || || | |||| | | || || || | |
Sbjct 715138 CTGCGCATGCCTTTCGAGTCTCCTGAGGCTCGAGAGCTGAACAAGCAGATCTTTGAGACC 715197
Query 94906 ATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACAC 94965
|| || | | || ||| ||||| || |||||| ||| | || || ||
Sbjct 715198 ATCTACCATGCTGCTCTGACTGCTTCCGTGCAGCTGGCCA---AGGAGGAGGGTCCTTAC 715254
Query 94966 GAATCGTTCCGCGGATCGCCCTTGGAAC--AGGGCATTTTTCAGTTCGACCTCTGGGGTG 95023
| ||| || || || || | |||| ||| | ||||||||| | ||| |
Sbjct 715255 TCTACCTTCAAGGGCTCTCC--TGCCTCTGAGGGTATTCTCCAGTTCGACATGTGGAACG 715312
Query 95024 TGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGGTG 95083
|||||||||| | ||| | |||||||| |||| | | | || | | || |||
Sbjct 715313 TGAAGCCCTCTGATCTCTGGGACTGGGAGTCTCTCAGGGAGCAGGTCAAGGAGCATGGTA 715372
Query 95084 TGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCA 95143
||| ||||| | |||||||||||||| ||| ||| |||||||||| || |
Sbjct 715373 CCCGCAACAGTCTGCTGCTTGCCCCCATGCCCACTGCCAGCACTTCGCAGATCCTGGGTA 715432
Query 95144 ACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGG 95203
||||||||| ||||| || | |||||||||| | ||| | | || || ||||| || |
Sbjct 715433 ACAACGAGTGCTTCGAGCCTTACACCTCCAACATCTACCAGCGTCGTGTCCTCGCTGGCG 715492
Query 95204 AATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTC--TCTGGGTGTGTGGGG 95261
| |||| ||| | ||| | || ||| || |||| | |||| |||||
Sbjct 715493 AGTTCCAGGTCGTTAACCCCTGGTTGCTCAAGGATCT--CGTCGATATGGGCCTGTGGTC 715550
Query 95262 TGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAAT 95321
|| | ||||||| | | | | ||||| ||| ||||||||||||| | ||
Sbjct 715551 GGATTCCATGAAGAACCGAATCATTGCTGAGAACGGTTCCATCCAGAACATCCCCAACAT 715610
Query 95322 ACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGCGTGATACT 95381
|| | || ||||||| ||||||||||||||||||||||| | |||||| | | |
Sbjct 715611 CCCCGCTGAGGTCAAGGCTCTCTACAAGACCGTGTGGGAGATTTCCCAGCGCCAGGTCGT 715670
Query 95382 CGACCACGCGGCCGCCCGCGGGCCCTTCAT 95411
| | || |||| ||| || |||||||
Sbjct 715671 CCAGATGGCAGCCGACCGAGGTGCCTTCAT 715700
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494722563043880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |