Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04- 27] 103 sequences; 46,940,970 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq37 333 3e-86 >seq37 Length=4018383 Score = 333 bits (368), Expect = 3e-86 Identities = 1108/1710 (65%), Gaps = 44/1710 (3%) Strand=Plus/Plus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| | ||||||| |||||| ||||| ||| || |||||||||||||| ||||||| | Sbjct 714019 TACCAATACTTTGGCTTCAAGACTCTTGAGCGATCCTACCTCCTCAAGATTGATGGCAAG 714078 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || ||||| || || || || | ||||| || || |||| || || || || Sbjct 714079 ATTGTTGAGCGCCCCCAGCACATGATCATGCGTGTTGCTGTCGGCATCTGGGGTGACAAC 714138 Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCACC 93897 || | ||| | | ||| || |||| | |||| | ||| ||| || Sbjct 714139 ATTGAGCGTGTCCTCGAGACTTACAACCTCATGTCGAGCAAGTTCTTCACCCATGCCTCC 714198 Query 93898 CCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT-GAC 93956 || ||||| ||||| ||||| || || ||| ||| | || || || ||||| | ||| Sbjct 714199 CCCACCCTCTTCAATGCGGGTACTCCCCAGCCTCAGCTCTCCTCATGCTTCCTTGTCGAC 714258 Query 93957 GAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTC 94016 | |||| ||| || || |||| || | |||||| |||||| | || || Sbjct 714259 -ATGAAGGAGGACAGTATTGAGGGTATTTATGATACTCTCAAGACCTGTGCCATGATTTC 714317 Query 94017 AAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACAT 94076 || || || || || || | | || ||| | ||||||| || |||||||| Sbjct 714318 CAAGATGGCTGGTGGTATTGGTCTGAACGTGCACCGAATCCGTGCCACTGGCTCCTACAT 714377 Query 94077 CCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGC 94136 | ||||||||| || ||||||||||| | ||||||||| || |||||||||||| | Sbjct 714378 CGCCGGTACCAACGGTACCTCCAACGGTGTTACCCCTATGCTTCGTGTCTTCAACAACAC 714437 Query 94137 GGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGA 94196 || || ||||| || |||||||| | | | ||| |||| || |||| || || Sbjct 714438 TGCCCGATACGTCGATCAGGGTGGCAACAAGCGACCTGGTGCTTTTGCCATCTACCTTGA 714497 Query 94197 GCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCT 94256 |||||||||||| || || | ||| | |||||||| |||||||||||||| || Sbjct 714498 GCCCTGGCACGCAGATGTCTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAAGA 714557 Query 94257 GGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGT 94316 || | || | ||| | ||| ||||||||| | || || || || ||||| || || Sbjct 714558 GGTCCGCGCTCGCGACTTGTTCCTGGCTCTCTGGATTCCCGATCTCTTCATGAAGCGTGT 714617 Query 94317 CGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGT 94376 |||||| ||| | ||||| ||| | |||||||| || |||||||| || ||||| Sbjct 714618 CGAGAAGAACGGTGACTGGACTCTGATGTGTCCCAACGAGTGTCCCGGTCTCGCCGAC-- 714675 Query 94377 TTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGGAA 94436 || || ||| || || | |||| ||||| | | | |||||| | || Sbjct 714676 ---TGCTACG----GTGAGGAGTTCGAGGCTCTGTACGAGAAGTATGAGAAGGCCGGCAA 714728 Query 94437 GGTT---------ATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGA 94487 || | ||| | || |||||| ||| || ||| | || | ||| || Sbjct 714729 GGGTCGCAAGACCATGAAGGCCCAGAAGCTCTGGTATGCCATCCTCGAGGCTCAGACCGA 714788 Query 94488 GACGGGTACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGC 94546 ||| |||| |||| ||| | | |||||| | ||| |||| |||| ||||||| || Sbjct 714789 GACTGGTAACCCCTTCATGCTCTACAAGGATCACTG-CAACCGCAAGAGCAACCAGAAGA 714847 Query 94547 ACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGG 94606 |||| || || ||||| || |||||||| ||||| ||||||| | | || | Sbjct 714848 ACCTGGGTACCATTCGCAGCTCCAACCTGTGCACTGAGATCATCGAGTACTGTGCCCCTG 714907 Query 94607 ACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCT 94666 | ||| ||||||| |||||||| | ||| || ||| || ||||| | ||| | Sbjct 714908 ATGAGGTTGCTGTCTGTAACCTTGCCTCTCTCGCCCTTCCCTCTTTCATCAACTATGACG 714967 Query 94667 ACACGT-CTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTC 94725 | | | ||| |||| | ||| | ||| || | | | | | | || Sbjct 714968 AGGCCTGCTATGACTTC-CAGAAGCTGCACGAG---GTCA----CACAG--ACTGTCGTT 715017 Query 94726 TTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCA 94785 |||||||||||| | || || |||| ||||||||| || || || ||| Sbjct 715018 CGCAACCTGAACAGGATCATTGATGTGAACCACTACCCCGTTCCTGAAGCTCGCAACAGC 715077 Query 94786 AACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATG 94845 ||| || || || || || ||| |||| ||||||||| | || || || | | Sbjct 715078 AACATGCGACACCGACCTATTGGCGTCGGTGTCCAGGGTCTTGCCGATGCTTTCCTTGCT 715137 Query 94846 ATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGC 94905 |||| |||| | ||| ||| || || | |||| | | || || || | | Sbjct 715138 CTGCGCATGCCTTTCGAGTCTCCTGAGGCTCGAGAGCTGAACAAGCAGATCTTTGAGACC 715197 Query 94906 ATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACAC 94965 || || | | || ||| ||||| || |||||| ||| | || || || Sbjct 715198 ATCTACCATGCTGCTCTGACTGCTTCCGTGCAGCTGGCCA---AGGAGGAGGGTCCTTAC 715254 Query 94966 GAATCGTTCCGCGGATCGCCCTTGGAAC--AGGGCATTTTTCAGTTCGACCTCTGGGGTG 95023 | ||| || || || || | |||| ||| | ||||||||| | ||| | Sbjct 715255 TCTACCTTCAAGGGCTCTCC--TGCCTCTGAGGGTATTCTCCAGTTCGACATGTGGAACG 715312 Query 95024 TGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGGTG 95083 |||||||||| | ||| | |||||||| |||| | | | || | | || ||| Sbjct 715313 TGAAGCCCTCTGATCTCTGGGACTGGGAGTCTCTCAGGGAGCAGGTCAAGGAGCATGGTA 715372 Query 95084 TGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCA 95143 ||| ||||| | |||||||||||||| ||| ||| |||||||||| || | Sbjct 715373 CCCGCAACAGTCTGCTGCTTGCCCCCATGCCCACTGCCAGCACTTCGCAGATCCTGGGTA 715432 Query 95144 ACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGG 95203 ||||||||| ||||| || | |||||||||| | ||| | | || || ||||| || | Sbjct 715433 ACAACGAGTGCTTCGAGCCTTACACCTCCAACATCTACCAGCGTCGTGTCCTCGCTGGCG 715492 Query 95204 AATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTC--TCTGGGTGTGTGGGG 95261 | |||| ||| | ||| | || ||| || |||| | |||| ||||| Sbjct 715493 AGTTCCAGGTCGTTAACCCCTGGTTGCTCAAGGATCT--CGTCGATATGGGCCTGTGGTC 715550 Query 95262 TGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAAT 95321 || | ||||||| | | | | ||||| ||| ||||||||||||| | || Sbjct 715551 GGATTCCATGAAGAACCGAATCATTGCTGAGAACGGTTCCATCCAGAACATCCCCAACAT 715610 Query 95322 ACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGCGTGATACT 95381 || | || ||||||| ||||||||||||||||||||||| | |||||| | | | Sbjct 715611 CCCCGCTGAGGTCAAGGCTCTCTACAAGACCGTGTGGGAGATTTCCCAGCGCCAGGTCGT 715670 Query 95382 CGACCACGCGGCCGCCCGCGGGCCCTTCAT 95411 | | || |||| ||| || ||||||| Sbjct 715671 CCAGATGGCAGCCGACCGAGGTGCCTTCAT 715700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722563043880