Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04- 27] 103 sequences; 46,940,970 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq32 102 6e-17 >seq32 Length=3227256 Score = 102 bits (112), Expect = 6e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| |||| | | ||| | || || ||||| || || || |||||||| |||||| Sbjct 1807629 CCACCACGCAGACGAAGAACCAGGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTG 1807688 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| ||| |||| || | ||| ||||| ||| | || | ||||||||||| ||| Sbjct 1807689 AGAGTTCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATAAGTCGCTGTTGGTCAGGAGGA 1807748 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 ||||||||||| || ||| || || || | || || || ||| ||| || Sbjct 1807749 ATTCCTTCCTTATCCTGAATCTTCGACTTCACGTTATCGATTGTGTCGGACGATTCCACC 1807808 Query 15130 TCTAA-GGTAATGGTT-TTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || ||| |||||| || || || ||||| || || || ||||||||| Sbjct 1807809 TCGAAGGGTGATGGTTCTTTCCAGTGAGAGTCTTGACGAAGATTTGCATA 1807858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357391551361355