Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04-
27] 103 sequences; 46,940,970 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq37 206 3e-48
seq54 181 1e-40
>seq37
Length=4018383
Score = 206 bits (228), Expect = 3e-48
Identities = 892/1388 (64%), Gaps = 62/1388 (4%)
Strand=Plus/Minus
Query 115526 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 115585
||||||||||||| || |||| | ||| ||||||||||| |||||||| || |
Sbjct 715846 TGAACTGAATGGGAGCAGCGGCAGCCTGCGTTCGCAGGTAGTACATGCCCGTCTTCAGAC 715787
Query 115586 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGTGTTGGACTTTCCATGA 115645
| |||||||| | | ||||| || | |||| | || || | ||||
Sbjct 715786 CGAGCTTCCAGCCGGCAAAGTGCATGCTGGTGATCTTGCCCATGGTGGGGTCCTTCATGT 715727
Query 115646 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCA 115705
|| ||| | | ||||| ||||| |||||| || || || || ||||| | | |
Sbjct 715726 GGATGTTGAGAGACTGGGACTGATCAATGAAGGCACCTCGGTCGGCTGCCATCTGGACGA 715667
Query 115706 CATCCTTCATCTTG---ATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGA 115762
| || || | || |||||||| || ||||||| ||| | ||| | ||||
Sbjct 715666 C---CTGGCGCTGGGAAATCTCCCACACGGTCTTGTAGAGAGCCTTGACCTCAGCGGGGA 715610
Query 115763 TATCCACGATATTTTGGATAGAGCCACCTGCCTTGACCATGA---GATCCTTCAT---AT 115816
| | ||| || ||||| || ||| || | |||| | | |||||| ||
Sbjct 715609 TGTTGGGGATGTTCTGGATGGA---ACCGTTCTCAGCAATGATTCGGTTCTTCATGGAAT 715553
Query 115817 CCTTTGACCAGAGACCAATCTTCTTGAGATCCT----CCACGAGGTGCTTATTGACAACA 115872
|| ||||| || || || | |||||||| | || ||| | || || ||
Sbjct 715552 CC---GACCACAGGCCCATATCGACGAGATCCTTGAGCAACCAGGGG----TTAACGACC 715500
Query 115873 ACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCAC 115932
||||| || |||||| || | | | |||||||||| ||||| ||||| ||||||
Sbjct 715499 TGGAACTCGCCAGCGAGGACACGACGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCAC 715440
Query 115933 TCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTG 115992
|| |||||||||| ||| || | ||| ||| ||||||||||| || | || || |||
Sbjct 715439 TCGTTGTTACCCAGGATCTGCGAAGTGCTGGCAGTGGGCATGGGGGCAAGCAGCAGACTG 715380
Query 115993 TTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGC-TT 116051
|||||| ||| | || | | | ||| |||| | |||||||| || || |
Sbjct 715379 TTGCGGGTACCATGCTCCTTGACCTGCTCCCTGAGAGACTCCCAGTCCCAG-AGATCAGA 715321
Query 116052 TGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAA 116111
| || | | | |||||| || |||||||| ||||| | || || || || |||| ||
Sbjct 715320 GGGCTTCACGTTCCACATGTCGAACTGGAGAATACCCTCAGAGGCAGGAGAGCCCTTGAA 715261
Query 116112 TGTCTCATATGGGCCCTCAACCTCCGCCAATT---CGGAGCTCGCCTCGAGGGCTGCGTG 116168
|| || || ||||| ||| |||| | |||| || || || || ||
Sbjct 715260 GGTAGAGTAAGGACCCTCCTCCTTGGCCAGCTGCACGGA---AGCAGTCAGAGCAGCATG 715204
Query 116169 ATACATTGTCTCAAAAATGCGAGCATTCATTGC-CTTG-GCCTCGTCGGAATCAAACGCG 116226
|| || |||||||| || | |||| || || | ||||| || || || |
Sbjct 715203 GTAGATGGTCTCAAAGATCTGCTTGTTCA--GCTCTCGAGCCTCAGGAGACTCGAAAGGC 715146
Query 116227 AGACGGCACA-AAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATG 116285
| | ||| | || || |||| || ||||| |||||||||| |||||| || || ||
Sbjct 715145 ATGC-GCAGAGCAAGGAAAGCATCGGCAAGACCCTGGACACCGACGCCAATAGGTCGGTG 715087
Query 116286 TCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATT 116345
|| ||| || || ||||| ||||| || ||| ||| || | ||| ||
Sbjct 715086 TCGCATGTTGCTGTTGCGAGCTTCAGGAACGGGGTAGTGGTTCACATCAATGATCCTGTT 715027
Query 116346 TAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGT 116405
|| || |||| || ||||| || || ||||| | | | ||| | || |
Sbjct 715026 CAGGTTGCGAACGACAGTCTGTGTGACCTCGTGCAGCTTCTGGAAGTCATA---GCAGGC 714970
Query 116406 CTCTTCA---TTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTC 116462
||| ||| |||| | |||||||||| || || || ||||| |||| |||
Sbjct 714969 CTCGTCATAGTTGATGAAAGAGGGAAGGGCGAGAGAGGCAAGGTTACAGACAGCAACCTC 714910
Query 116463 ATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAA 116522
||| || |||||| || || || || |||| || || || |||||| ||||
Sbjct 714909 ATCAGGGGCACAGTACTCGATGATCTCAGTGCACAGGTTGGAGCTGCGAATGGTACCCAG 714850
Query 116523 GTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGT 116582
|||||| || || ||| ||| || ||||||||||||||| | || | || ||
Sbjct 714849 GTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTACCAGT 714790
Query 116583 CTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGG 116641
||| || || | || ||| || || | ||| | | || | ||| || ||| |||
Sbjct 714789 CTCGGTCTGAGCCTCGAGGATGGCATACCAGAGCTTCTG-GGCCTTCA---TGGTCTTG- 714735
Query 116642 CTCGCCCCT------CCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAG 116695
|| |||| ||| ||| ||||| ||| || ||||| ||||| ||| || ||
Sbjct 714734 --CGACCCTTGCCGGCCTTCTCATACTTCTCGTACAGAGCCTCGAACTCCTCA-CCGTAG 714678
Query 116696 C-CTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCA 116754
| || | ||| || || || | ||||| | |||| ||| | ||| || |||
Sbjct 714677 CAGTCGGCGAGACCGGGACACTCGTTGGGACACATCAGAGTCCAGTCACCGTTCTTCTCG 714618
Query 116755 ACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCT 116814
|| |||||||||||||| || || |||||||| ||| ||| | || ||| ||| |
Sbjct 714617 ACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCCAGGAACAAGTCGCGAGCGCGGACC 714558
Query 116815 TCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGT 116874
||||| | || || || |||| || | || || | || ||| |||||||| ||
Sbjct 714557 TCTTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGC 714498
Query 116875 TCCAGGTA 116882
|| |||||
Sbjct 714497 TCAAGGTA 714490
>seq54
Length=1261221
Score = 181 bits (200), Expect = 1e-40
Identities = 539/818 (66%), Gaps = 25/818 (3%)
Strand=Plus/Plus
Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290
|||||| ||||| ||||||||||||||||| ||||| ||| | ||| ||| ||||||||
Sbjct 1145167 GTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCCAGGGAGATGTTCTCCAT 1145226
Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGCACCCCAATCTGTTTGAGG 127345
|| || || ||||| || || | | | |||| |||| | ||||
Sbjct 1145227 GAAGTCGAAGGGGTTGGCAGACTTGTAGACCTTCTCGTTG----CCCAGGGCGAC-GAGG 1145281
Query 127346 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGG 127405
||||| || | |||| |||| ||||||| ||| | | |||||| |||| ||||
Sbjct 1145282 AGACGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTTGGCGTTCATGCCGAGGAGG 1145341
Query 127406 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATG 127465
|| ||||| || || | |||| ||| ||||||| || || || | ||||
Sbjct 1145342 GCGCAGGGGAGAGCCTCAGTCAGGAACTCCTGCTCAATGGTGACGGCATCAGTGATGATG 1145401
Query 127466 GCGTGAATAGTGTCCACCC---CAGGTCTATTGCGTAAAGTCTTGAAGAGTTCCACAGCA 127522
| || || | | | | || | | ||| | | | || ||| || |||
Sbjct 1145402 TCCTGGATGATCTGCTTGCTGGCACGGCCCTTGAGGTGGGAGTGGAGGAGG--CAG-GCA 1145458
Query 127523 AACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGC 127582
|| || ||| |||||||| ||||| |||||||| || || |||||| |||||| |||
Sbjct 1145459 AAGTCGGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCGGGC 1145518
Query 127583 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCC 127642
|||||||| |||||||| | |||||| || | | ||| | ||| ||||||||| |||
Sbjct 1145519 ATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCACCACTGAAGAAGATACCC 1145578
Query 127643 TCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGT-ATCAAACCA 127701
|| || ||||| |||| ||||||| |||||||| | | | |||| | | |||
Sbjct 1145579 TCGACGGCAGCGAAGGCAACGAGACGCTGAGCAAAGGA-AGAGTCCTTGTCCTGGATCCA 1145637
Query 127702 CTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAG 127761
| || ||||| | ||||| || ||| || |||| ||||| || || | |||||
Sbjct 1145638 TCTGATAGCCCAGTCGGCCTTCTTGCGGATGCAAGGGATGGTCTCAATGGCGTTGAAGAG 1145697
Query 127762 TTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCC 127821
| | | || || || |||||||| | || ||||| || || || |||
Sbjct 1145698 ATAGGTTCGCTGAGAAGGCTCCTTGATGTAGGTGTCAATGAGCAGGGAGTAGGTCTCGGA 1145757
Query 127822 GTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTA 127880
||||| | | ||| || | ||| | ||||||| | || || ||| ||||| |
Sbjct 1145758 GTGGATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCATCGAGCCTCGGGGATCTGAA 1145816
Query 127881 CCTCATCGGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAA 127939
|||| | || ||| | | | | |||||| || || || || || | || ||
Sbjct 1145817 CCTC-GCCGCTGAATCGCTCAACAAGATTCTCGTTGACGATGCCGTCAGAGGCGGCGAAG 1145875
Query 127940 AACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCG 127996
|| || ||||| | ||||| ||| || | | ||| || | |||||||||
Sbjct 1145876 AAGGCAAGGATGTGAGAGATGAAGAACTGCTCGTCAGAGGTCAGGCGGTTGTTCCAGTCG 1145935
Query 127997 TCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034
| ||||||||| || ||||| | |||||| ||||||||
Sbjct 1145936 TGGAGATCCTTGGACAGATCAATCTCCTCGGCAGTCCA 1145973
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613506410109480
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