Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04-
27] 103 sequences; 46,940,970 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq54 179 6e-40
seq37 156 7e-33
>seq54
Length=1261221
Score = 179 bits (198), Expect = 6e-40
Identities = 313/453 (69%), Gaps = 2/453 (0%)
Strand=Plus/Plus
Query 159917 AGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATG 159976
|||||||| ||||||||| ||| || ||||| || |||||||||| ||||||||| | |
Sbjct 1145447 AGGAGGCAGGCAAAGTCGGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAG 1145506
Query 159977 ATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTA 160036
| || || ||||||| |||||| |||||||| || |||| ||||| ||||| ||
Sbjct 1145507 GTCAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCACCACTG 1145566
Query 160037 AAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTG 160096
|| ||||| ||||| ||||| || || || ||||| | || | |||| || | || ||
Sbjct 1145567 AAGAAGATACCCTCGACGGCAGCGAAGGCAACGAGACGCTGAGCAAAGGAAGAGTCCTTG 1145626
Query 160097 TCATGGGTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACG 160156
|| ||| |||| || | ||||| || |||||||| |||||| || ||| ||| | |
Sbjct 1145627 TCCTGGATCCATCTGATAGCCCAGTCGGCCTTCTTGCGGATGCAAGGGATGGTCTCAATG 1145686
Query 160157 GCGTTAAACA-ATCTGTCCTGCTCCTTCACATCCTTGATCAGAGTAGCAATCAGCTTCGA 160215
||||| || | || || | ||| |||||||| || |||| ||| ||
Sbjct 1145687 GCGTTGAAGAGATAGGTTC-GCTGAGAAGGCTCCTTGATGTAGGTGTCAATGAGCAGGGA 1145745
Query 160216 GTACATTTCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTC 160275
||| | || | ||| | || || || ||||| ||| |||||| || |||||
Sbjct 1145746 GTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGAGCCTC 1145805
Query 160276 CAGATACTGCACCTCCTGTGTGAACCTTTGACCCAGATTGGCATTAACCAACCCGTCGGC 160335
| ||| ||||| |||| | | | | ||||| | || || | ||||| |
Sbjct 1145806 GGGGATCTGAACCTCGCCGCTGAATCGCTCAACAAGATTCTCGTTGACGATGCCGTCAGA 1145865
Query 160336 GGCCGCAAAGAAAGCCAACACGTGAGAGATGAA 160368
||| || ||||| || | | ||||||||||||
Sbjct 1145866 GGCGGCGAAGAAGGCAAGGATGTGAGAGATGAA 1145898
>seq37
Length=4018383
Score = 156 bits (172), Expect = 7e-33
Identities = 456/681 (67%), Gaps = 20/681 (3%)
Strand=Plus/Minus
Query 203843 TCCACCGTGAACTGAATGGCGTTCA-CGGCAGGCCTGC-TTCTCAGATAGTACATGCCGG 203900
|| || ||||||||||||| | || |||||| ||||| ||| ||| ||||||||||| |
Sbjct 715853 TCGACAGTGAACTGAATGG-GAGCAGCGGCAG-CCTGCGTTCGCAGGTAGTACATGCCCG 715796
Query 203901 TCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGT 203960
|||| || || || ||| ||| | ||||||| | | |||| || | ||||||
Sbjct 715795 TCTTCAGACCGAGCTTCCAGCCGGCAAAGTGCATGCTGGTGATCTTGCCCATGGTGGGGT 715736
Query 203961 CGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCC 204019
| |||||| ||||| ||||||||| || || ||| ||||| || || || || |||
Sbjct 715735 CCTTCATGTGGATGTTGAGAGACTGGGACTGATCAATG-AAGGCACCTCGGTCGGCTGCC 715677
Query 204020 ATATTGATAA--TGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGT 204077
|| | || | ||| ||| |||||||||||||| |||||| | | | || ||
Sbjct 715676 ATCTGGACGACCTGG--CGCTGGGAAATCTCCCACACGGTCTTGTAGA-GAGCCT--TGA 715622
Query 204078 GTTGAG-GCACATCTT-CCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATCC 204134
| || | || || | || || ||| || ||||| || || || | || ||
Sbjct 715621 CCTCAGCGGGGATGTTGGGGATGTTCTGGATGGAACCGTTCTCAGCAATGATTCGGTTCT 715562
Query 204135 TCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGA 204194
|| | ||| ||||| ||||| || || ||| | || |||||| | ||
Sbjct 715561 TCATGGAATCCGACCACAGGCCCATATCGACGAGATCCTTGAGCAACCAGGGGTTAACGA 715502
Query 204195 TCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACG 204254
||| || || || | || || | || | | | |||| |||| | || |||||
Sbjct 715501 CCTGGAACTCGCCAGCGAGGACACGACGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGC 715442
Query 204255 CCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGG 204314
||||||||| || | ||||| | |||||||| ||||||||||| || || |||||
Sbjct 715441 ACTCGTTGTTACCCAGGATCTGCGAAGTGCTGGCAGTGGGCATGGGGGCAAGCAGCAGAC 715382
Query 204315 AGTTGCGCACACCGTATTTTTGGACCCTGC-GCTTCAGAGAGGTCCAGTCGTGCATCGCA 204373
|||||| ||| | | | || ||||| | | ||||| |||||| | ||
Sbjct 715381 TGTTGCGGGTACCATGCTCCTTGA-CCTGCTCCCTGAGAGACTCCCAGTCCCAGAGATCA 715323
Query 204374 CTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCTTG 204433
||| |||||| ||||||||||||||| | || || | | | | || |||||||
Sbjct 715322 GAGGGCTTCACGTTCCACATGTCGAACTGGAGAATACCCTCAGAGGCAGGAGAGCCCTTG 715263
Query 204434 TACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCAC-GAGGCGGCCATGGCGTGATA 204492
| || | ||||| ||||| | |||||| ||||| || || | || || ||
Sbjct 715262 AAGGTAGAGTAAGGACCCTCCTCCTTGGCCAGC-TGCACGGAAGCAGTCAGAGCAGCATG 715204
Query 204493 GTACATGGTCTCAAAGATCTG 204513
||| |||||||||||||||||
Sbjct 715203 GTAGATGGTCTCAAAGATCTG 715183
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795154176237680
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