Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04-
27] 103 sequences; 46,940,970 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq28 286 4e-72
>seq28
Length=4887614
Score = 286 bits (316), Expect = 4e-72
Identities = 444/632 (70%), Gaps = 12/632 (2%)
Strand=Plus/Plus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|||||||| |||||||||||||| || || || || || | ||||| || ||||||||
Sbjct 2272496 TCGAAATCCTCACCACCCAAGTGAGTGTCACCGGCAGTAGACTTGACCTCGAAGATACCC 2272555
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
| |||||| | | | |||||||| || ||||||||||| || || || ||||| |||
Sbjct 2272556 TCCTCAATGGTCAGGAGAGAAACATCGAAGGTACCACCACCGAGATCGAAGATGAGGACG 2272615
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
|| || | || | ||||| ||||||||||| || || || || || || || ||
Sbjct 2272616 TTGCGCTCACCCTCGATCTTCTTGTCGAGACCGTAGGCAATGGCAGCGGCGGTAGGCTCG 2272675
Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696
|| || || || ||| ||| ||||||||||| | ||||| || || || || ||
Sbjct 2272676 TTGATGATTCGGAGAACGTTGAGGCCAGCAATGAGACCGGCATCCTTGGTAGCCTGACGC 2272735
Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756
|| || ||||| |||||||| || || || ||||| |||| |||| ||| ||||||
Sbjct 2272736 TGAGAGTCGTTGAAGTAGGCAGGAACGGTGACGACAGCGTTGTTGACGGTCTCACCGAGG 2272795
Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816
|| || || ||| | ||| ||| |||||||| ||||| || || ||||| || | |
Sbjct 2272796 TAAGACTCGGCGGTCTCTCGCATCTTGGTAAGGACCATGGAGGAGATCTCCTCGGGGGTG 2272855
Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACC---G 7873
|| ||| || || || || ||||| || || || || || || |||| |
Sbjct 2272856 AAGGTCTTCTGCTCGCCCTTGAACTCAACCTCGATGATAGGCTT----GC--CACCCTTG 2272909
Query 7874 GGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTT 7933
||| | ||| | | | | ||||| ||| | ||||||| |||| | |||||
Sbjct 2272910 TCGATGATCTTGAAGGGGAAGTGCTTCATGTCGGCCTGGACCTCAGGGTCGGCGAACTTG 2272969
Query 7934 CTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTC 7993
| ||||| | |||||| ||||| || || ||||| | |||||||||||| ||||||
Sbjct 2272970 CGACCGATCAAACGCTTGGCATCGAAGACAGTGTTCTGGGGGTTCATGGCAACCTGGTTC 2273029
Query 7994 TTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTC 8053
|| || || || ||||| ||||| || | || || || ||||| | || || ||
Sbjct 2273030 TTGGCGGCATCACCGATCAGACGCTC---GGTGTCGGTGAAACCGACGAAAGAGGGAGTG 2273086
Query 8054 GTTCGATTCCCTTGGTCGTTCGCAATAATTTC 8085
||||| || || |||||||| || ||||| ||
Sbjct 2273087 GTTCGGTTACCCTGGTCGTTGGCGATAATGTC 2273118
Score = 149 bits (164), Expect = 8e-31
Identities = 347/519 (67%), Gaps = 11/519 (2%)
Strand=Plus/Plus
Query 7244 AGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAA 7303
|| ||||| ||||| |||||||| ||||| | ||| || | || ||| | | ||
Sbjct 1901700 AGGTCCTCGAAACGGGCACGGGTGATGGACATGGTGAAGTCCTCACCATCGAAGAGAGAG 1901759
Query 7304 TCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCC 7363
||||| |||||||| | || || ||||| | || ||||| || ||||| || ||
Sbjct 1901760 TCAATCTCAATGGTGGCCTGGGCACCGGAAGAGAGGGTACGCTTGGCACGCTCGCAAGCA 1901819
Query 7364 GTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTA 7423
||||| | ||| || || ||||| | | || || | || |||||| || ||
Sbjct 1901820 GTTCGGAGACGTCGGAGAGCACGGGCATCGCCAGACAGGTCCTTCTTAGTCTTGCGGCCG 1901879
Query 7424 AACTCTTCAGAGAAGTG-TCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGT 7482
||||| | | |||| |||| |||| | | |||||| || | |||||||| || ||
Sbjct 1901880 AACTCCTTCTTGCAGTGGTCGA-GGAGGTTGGTATCGAAGTCCTGACCACCCAGATGGGT 1901938
Query 7483 ATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATC 7542
|| || ||||| || ||||| |||| ||| || | ||||| | | || |||||
Sbjct 1901939 GTCACCAGCGGTGGCCTTGACAGTGAAGACACCACCCTGGATGTTGAGGAGGGAGACATC 1901998
Query 7543 AAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATC 7602
|| ||||||||||| || || | ||||| ||||| || | ||| | ||| |
Sbjct 1901999 GAAAGTACCACCACCGAGATCGTAGATGAGAACGTTGCGCTC--CTTCTCAG-ACTTGCC 1902055
Query 7603 G------AGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTT 7656
| |||||||| ||||| || || || || || || || || ||||| || |||
Sbjct 1902056 GGAGCCAAGACCGTAGGCGATGGCGGCAGCAGTAGGCTCGTTGATGATACGGAGGACGTT 1902115
Query 7657 CAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGC 7716
|| || || || | | || || || || || ||||| || ||||| ||||||||
Sbjct 1902116 GAGACCGGCGATGGAACCGGCGTCCTTGGTGGCCTGTCGCTGGTTGTCGTTGAAGTAGGC 1902175
Query 7717 CGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755
||||| || | ||| || | | || ||||| || ||
Sbjct 1902176 AGGGACAGTGATGACGGCCTTCTCAACCTTCTTGCCAAG 1902214
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635131982266520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |