Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04-
27] 103 sequences; 46,940,970 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq37 280 2e-70
seq54 145 9e-30
seq57 91.5 2e-13
>seq37
Length=4018383
Score = 280 bits (310), Expect = 2e-70
Identities = 974/1494 (65%), Gaps = 47/1494 (3%)
Strand=Plus/Plus
Query 111546 TATTTTGGTCTCAAGACCCTCGAGAAAAGCTACCTCCA-AAGACTGGATGGTGTCTTGAT 111604
|| ||||| ||||||| || ||| | |||||||| |||| || |||| | |
Sbjct 714025 TACTTTGGCTTCAAGACTCTTGAGCGATCCTACCTCCTCAAGATTG-ATGGCAAGATTGT 714083
Query 111605 GGAAACCCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGA 111664
|| ||| ||| ||||| ||||||| || || |||| ||| || || | |||||
Sbjct 714084 TGAGCGCCCCCAGCACATGATCATGCGTGTTGCTGTCGGCATCTGGGGTGACAACATTGA 714143
Query 111665 TTCTGTTTTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAAC 111724
||| | ||||| ||| || ||||| | | |||| ||| || | || ||
Sbjct 714144 GCGTGTCCTCGAGACTTACAACCTCATGTCGAGCAAGTTCTTCACCCATGCCTCCCCCAC 714203
Query 111725 CCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAA 111784
||||||||| || ||||| || || || | ||| || |||||| | | | ||
Sbjct 714204 CCTCTTCAATGCGGGTACTCCCCAGCCTCAGCTCTCCTCATGCTTCCTTGTCGACATGAA 714263
Query 111785 GGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTG 111844
|||||| || | || ||||| | ||||||| |||||| || || |||
Sbjct 714264 GGAGGACAGTATTGAGGGTATTTATGATACTCTCAAGACCTGTGCCATGATTTCCAAGAT 714323
Query 111845 GGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTAT-TAGA- 111902
|||||||||||| || || || | || || | |||| | ||| || | |
Sbjct 714324 GGCTGGTGGTATTGGTCTGAACGTGCACCGAATCCGTGCCACT--GGCTCCTACATCGCC 714381
Query 111903 GGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 111962
||||| || ||| || | ||| ||| || |||||||| || || ||| ||| ||
Sbjct 714382 GGTACCAACGGTACCTCCAACGGTGTTACCCCTATGCTTCGTGTCTTCAACAACACTGCC 714441
Query 111963 CGCTATGTAAACCAAGCTGGGCGTC--GCAAG--GGATCTATCGCAGTCTATCTTGAGCC 112018
|| || || | || | ||| | | || | || || | || |||| ||||||||
Sbjct 714442 CGATACGTCGATCAGGGTGG-CAACAAGCGACCTGGTGCTTTTGCCATCTACCTTGAGCC 714500
Query 112019 ATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG- 112077
|||||||| ||| || | ||||||||||| |||| ||||| || | || ||||
Sbjct 714501 CTGGCACGCAGATGTCTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAAGAGGT 714560
Query 112078 -CGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTT 112136
|||| | ||||| | ||| |||||||||||||| ||||||||||||||| | ||
Sbjct 714561 CCGCGCT--CGCGACTTGTTCCTGGCTCTCTGGATTCCCGATCTCTTCATGAAGCGTGTC 714618
Query 112137 GAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCC 112196
||| ||| || | ||| |||| | ||||| || || ||||||||| |||| |
Sbjct 714619 GAGAAGAACGGTGACTGGACTCTGATGTGTCCCAACGAGTGTCCCGGTCTCGCCGACTGC 714678
Query 112197 GTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAG------AAAGTCGGGCG 112250
||||||||||| || || || ||| ||||| ||| | | | |||| |
Sbjct 714679 TACGGTGAGGAGTTCGAGGCTCTGTACGAGAAGTATGAGAAGGCCGGCAAGGGTCGCAAG 714738
Query 112251 ACTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACT 112310
|| || || |||| || | ||| | || || ||| || |||| |||||||||
Sbjct 714739 ACCATGAAGG-CCCAGAAGC-----TCTGGTATGCCATCCTCGAGGCTCAGACCGAGACT 714792
Query 112311 GGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTG 112370
|||| || | ||||| ||||| || ||| |||| ||||| || || ||||| ||
Sbjct 714793 GGTAACCCCTTCATGCTCTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACCTG 714852
Query 112371 GGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAG 112430
||| || || |||||||| || || || ||| | || | | | ||||||
Sbjct 714853 GGTACCATTCGCAGCTCCAACCTGTGCACTGAGATCATCGAGTACTGTGCCCCTGATGAG 714912
Query 112431 ACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATC--CAGAGACAA 112488
||||| |||||||| || || |||| || ||| | | | ||| | ||| |
Sbjct 714913 GTTGCTGTCTGTAACCTTGCCTCTCTCGCCCTTCCC---TCT-TTCATCAACTATGACGA 714968
Query 112489 AGAC--ATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAA 112546
| | | ||| | | || || ||||| || || | |||||| ||||| ||
Sbjct 714969 GGCCTGCTATGACTTCCAGAAGCTGCACGAGGTCACACAGACTGTCGTTCGCAACCTGAA 715028
Query 112547 CAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACA 112606
||| | |||||| || ||||||||| ||||| || || ||| ||||
Sbjct 715029 CAGGATCATTGATGTGAACCACTACCCCGTTCCTGAAGCTCGCAACAGCAACATGCGACA 715088
Query 112607 CCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACG 112665
||| || ||||| |||||||||| ||||| || |||| ||| || || || || || |
Sbjct 715089 CCGACCTATTGGCGTCGGTGTCCAGGGTCTTGCCGATGCTTTCCTTGCTCTG-CG-CATG 715146
Query 112666 CATTT-GATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCAC 112724
| ||| || || || || || | || || || |||||||| || || ||
Sbjct 715147 CCTTTCGAGTCTCCTGAGGCTCGAGAGCTGAACAAGCAGATCTTTGAGACCATCTACCAT 715206
Query 112725 GCCGCTCTTGAGGCGAGTTC---GGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTT 112781
|| ||||| | | ||| | || |||| ||| || ||||| || |||||
Sbjct 715207 GCTGCTCT---GACTGCTTCCGTGCAGCTGGCCAAGGAGGAGGGTCCTTACTCTACCTTC 715263
Query 112782 GAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTG-AGACCAA 112840
|||| ||||| || || | || | || || || || |||| |||| ||| || ||
Sbjct 715264 AAGGGCTCTCCTGCCTCTGAGGGTATTCTCCAGTTCGACATGT-GGAACGTGAAGCCCTC 715322
Query 112841 GCTTCACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAG 112900
|| || |||||||| |||||| ||| | |||||||| | ||| || |||||
Sbjct 715323 TGATCTCTGGGACTGGGAGTCTCTCAGGGAGCAGGTCAAGGAGCATGGTACCCGCAACAG 715382
Query 112901 TCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATG 112960
||| || | || || ||||| || ||| ||| | || ||| ||||||| || || ||
Sbjct 715383 TCTGCTGCTTGCCCCCATGCCCACTGCCAGCACTTCGCAGATCCTGGGTAACAACGAGTG 715442
Query 112961 CTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTT 113014
||| || || ||||| | |||||||| | | | | |||||| || |||||
Sbjct 715443 CTTCGAGCCTTACACCTCCAACATCTACCAGCGTCGTGTCCTCGCTGGCGAGTT 715496
>seq54
Length=1261221
Score = 145 bits (160), Expect = 9e-30
Identities = 209/287 (73%), Gaps = 6/287 (2%)
Strand=Plus/Minus
Query 102048 CTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGC-AGCTCTTTGAAGCCATCCA 102106
||||| |||| || || ||||| | || || ||| | | ||||| | ||||| |
Sbjct 1145739 CTCATTGACACCTACATCAAGGAGCCTTCTCAGC-GAACCTATCTCTTCAACGCCATTGA 1145681
Query 102107 AACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGT 102165
|| | || || || | ||||| || || |||||||| | ||| | | |||| |
Sbjct 1145680 GACCATCCCTTGCATCCGCAAGAAGGCCGACTGGGCTATCAGATGGATCCAGGACAAGGA 1145621
Query 102166 CGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 102225
| | |||||||||| |||| ||| | || || || || ||||||||||||||| ||
Sbjct 1145620 CTC-TTCCTTTGCTCAGCGTCTCGTTGCCTTCGCTGCCGTCGAGGGTATCTTCTTCAGTG 1145562
Query 102226 GTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTC 102284
|| |||| ||| | || | |||||||||||||| ||||||||||| ||||| ||||
Sbjct 1145561 GTGCCTT-TGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTGACCTTC 1145503
Query 102285 TCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331
||||||||||| ||||||||||| ||||| || ||| || |||||
Sbjct 1145502 TCCAACGAGCTCATCTCTCGTGATGAGGGTCTTCACACCGACTTTGC 1145456
>seq57
Length=2357170
Score = 91.5 bits (100), Expect = 2e-13
Identities = 190/275 (69%), Gaps = 10/275 (4%)
Strand=Plus/Minus
Query 16064 GGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAG 16123
||| || |||||||||||||||| |||||| || || | ||| | | | || ||
Sbjct 875208 GGCGTCGATCTCATCAATGAAGATGATGCAAGGAGCGTTCTTGCGGCCTTCGGCGAACAG 875149
Query 16124 ATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-AC 16182
||| || ||||| | || ||||| ||||||||||| || || | | || ||
Sbjct 875148 ATCTCGCACACGAGAAGGACCAACACCCACAAACATCTCGACGAATTCAGAACCGCTCAC 875089
Query 16183 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 16242
| || | ||||||||| ||| || || || |||| |||||| || ||||||||||
Sbjct 875088 ACTGAA-GAAGGGGACTCCAGACTCGCCAGCCGTGGCCTTGGCGAGCAGTGTCTTACCCG 875030
Query 16243 TACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC--ACTTC-CAAAGT 16299
|||| || || || || | || ||||| || |||||||| || |||| | || |
Sbjct 875029 TACCAGGGGGGCCAGCCAGAATTGCTCCTCGGGGGATCTTGGCACCGAGCTTCTCGAACT 874970
Query 16300 ATCTCTCAGGTTGCTT-AAGAAAATCCACAATCTC 16333
|||| || ||||| ||||| | ||||| |||
Sbjct 874969 ---TCTCGGGCTGCTTCAAGAAGCT-CACAAACTC 874939
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620741600794160
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