Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04-
27] 103 sequences; 46,940,970 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq37 262 5e-65
seq54 87.8 2e-12
>seq37
Length=4018383
Score = 262 bits (290), Expect = 5e-65
Identities = 1031/1589 (65%), Gaps = 57/1589 (4%)
Strand=Plus/Minus
Query 105752 ATTTCCCACACTGTGCGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGA 105811
|| |||||||| || ||||||| ||||| ||| | ||||| | | ||| || ||
Sbjct 715652 ATCTCCCACACGGTCTTGTAGAGAGCCTTGACCTCAGCGGGGATGTTGGGGATGTTCTGG 715593
Query 105812 ATTGAACC---CCCCGCCTTGACCATGAGATCCTTCAT---ATCCTTGGACCAAAGACCA 105865
|| ||||| | | || ||| | | | |||||| |||| ||||| || ||
Sbjct 715592 ATGGAACCGTTCTCAGCAATGA---TTCGGTTCTTCATGGAATCC---GACCACAGGCCC 715539
Query 105866 ATCTTCTTGAGATCATTGACGAGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTT 105925
|| | |||||| |||| | ||| || | | ||||| || ||||||
Sbjct 715538 ATATCGACGAGATCCTTGAGCAACCAGGGGTTAACGACCTGGAACTCGCCAGCGAGGACA 715479
Query 105926 CTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGT 105985
| | | | |||||||| | ||||| || || ||||| || || ||||||| ||| ||
Sbjct 715478 CGACGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGTTACCCAGGATCTGC 715419
Query 105986 GCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTG 106045
| ||| ||| || ||||| || || | || |||||||| || ||| | ||||||
Sbjct 715418 GAAGTGCTGGCAGTGGGCATGGGGGCAAGCAGCAGACTGTTGCGGGTACCATGCTCCTTG 715359
Query 106046 ATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGAGCTT--GGTTTCACCTTCCCACATAT 106103
| | ||| ||||| |||||||| || || | || ||||| |||| |||| |
Sbjct 715358 ACCTGCTCCCTGAGAGACTCCCAGTCCCAGA-GATCAGAGGGCTTCACGTTCC-ACATGT 715301
Query 106104 CAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGG 106163
| || || || | || | || | ||||| |||| || || || | ||| |
Sbjct 715300 CGAACTGGAGAATACCCTCAGAGGCAGGAGAGCCCTTGAAGGTAGAGTAAGGACCCTCCT 715241
Query 106164 CTTCAGCCAATT-CACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGA 106222
| | |||| | ||| | || ||| | || || || ||||| |||||||| |
Sbjct 715240 CCTTGGCCAGCTGCACGGAA-GCAGTCAGAGCAGCATGGTAGATGGTCTCAAAGATCTGC 715182
Query 106223 GCATTCATCTCCTTGGCTTCATCTGAATC-AAATGCGTAGCGGCACAA-AATAAATACAT 106280
|||| ||| || ||| || || ||| || | ||| || | || || |||
Sbjct 715181 TTGTTCAGCTCTCGAGCCTCAGGAGACTCGAAAGGCAT-GCG-CAGAGCAAGGAAAGCAT 715124
Query 106281 CCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAG 106340
| || ||||| || ||||| | |||||||||| ||||||||| || || | ||| ||
Sbjct 715123 CGGCAAGACCCTGGACACCGACGCCAATAGGTCGGTGTCGCATGTTG--CTGTTGCG-AG 715067
Query 106341 TCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCT 106397
||| ||||| || || ||||||| | ||| || || ||| |||
Sbjct 715066 CTTCAGGAACGGGGTAGTGGTTCACATCAATGATCCTGTTCAGGTTGCGAACGACAGTCT 715007
Query 106398 TTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCAT---TGACATACT 106454
||||| || || || || | | ||| | || | ||| |||| ||| |
Sbjct 715006 GTGTGACCTCGTGCAGCTTCTGGAAGTCATA---GCAGGCCTCGTCATAGTTGATGAAAG 714950
Query 106455 TTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTA 106514
|||||||||| || || | || || ||||| |||||| | |||||| |
Sbjct 714949 AGGGAAGGGCGAGAGAGGCAAGGTTACAGACAGCAACCTCATCAGGGGCACAGTACTCGA 714890
Query 106515 AAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTT 106574
|| || || |||| |||||| || ||| || |||| ||||| ||||| |||||
Sbjct 714889 TGATCTCAGTGCACAGGTTGGAGCTGCGAATGGTACCCAGGTTCTTCTGGTTGCTCTTGC 714830
Query 106575 TGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAA 106634
|||||| |||||||||||||||| |||| | || ||||| ||||| | || ||| |
Sbjct 714829 GGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCGAGGA 714770
Query 106635 TTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTGG--CCCGTCCCT-CCGCCTCG 106690
| || | ||| | | || | | || |||| ||| ||| | || || |||
Sbjct 714769 TGGCATACCAGAGCTTCTGGGCCTTC----ATGGTCTTGCGACCCTTGCCGGCCTTCTCA 714714
Query 106691 TACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTG 106750
||||| ||| || || || ||||||||||| ||||| |||||| || || |
Sbjct 714713 TACTTCTCGTACAGAGCCTCGAACTCCTCACCGTAGCAGTCGGCGAGACCGGGACACTCG 714654
Query 106751 TCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGA 106810
| ||||| | |||| ||| | ||| || ||| || ||||||||||| || || |||
Sbjct 714653 TTGGGACACATCAGAGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAAGAGATCGGGA 714594
Query 106811 ATCCACAGGG--ATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTC 106868
||||| || | | ||| | || || | | || ||||||| | || ||||| |
Sbjct 714593 ATCCAGAGAGCCAGGAACA-AG-TCGCGAGCGCGGACCTCTTCCTTGCCGTGGTTCTTGC 714536
Query 106869 GTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATC 106928
| | ||||||||||| | || ||| |||||||| |||||||| |||| || | || |
Sbjct 714535 GCAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAAGCAC 714476
Query 106929 CCTTTCGACGC---CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCA 106985
| ||| ||| | |||| || || || || ||| ||| || || |||||||
Sbjct 714475 CAGGTCGCTTGTTGCCACCCTGATCGACGTATCGGGCAGTGTTGTTGAAGACACGAAGCA 714416
Query 106986 TTGGAATAATACCATCTGATTGACCATTTGTCCCC-CGAA-TACGAGATTTATTGGCTCT 107043
| || ||| ||| | || ||| || || || ||| || ||| | |||| |
Sbjct 714415 TAGGGGTAACACCGTTGGAGGTACCGTTGGTACCGGCGATGTAGGAGCC--AGTGGCACG 714358
Query 107044 CACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGT 107103
| || | || || |||||||| |||||| ||| || || ||||| | |
Sbjct 714357 GATTCGGTGCACGTTCAGACCAATACCACCAGCCATCTTGGAAATCATGGCACAGGTCTT 714298
Query 107104 AAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGA 107163
||||| |||| ||||| | || ||||||||| || ||| ||||||||| |||
Sbjct 714297 GAGAGTATCATAAATACCCTCAATACTGTCCTCCTTCATGTCGACAAGGAAGCATGAGGA 714238
Query 107164 CATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACC 107223
| ||| || || ||||| |||||||||||||| || | || || ||| | | |
Sbjct 714237 GAGCTGAGGCTGGGGAGTACCCGCATTGAAGAGGGTGGGGGAGGCATGGGTGA--AGAAC 714180
Query 107224 TTG--GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCG 107281
||| ||||| || ||| ||||| | |||| ||||||| || || |||||||
Sbjct 714179 TTGCTCGACATGAGGTTGTAAGTCTCGAGGACACGCTCAATGTTGTCACCCCAGATGCCG 714120
Query 107282 ATGGCCACACGCATAAACATGTATTGGGG 107310
| || |||||||| | ||||| |||||
Sbjct 714119 ACAGCAACACGCATGATCATGTGCTGGGG 714091
>seq54
Length=1261221
Score = 87.8 bits (96), Expect = 2e-12
Identities = 148/209 (71%), Gaps = 4/209 (2%)
Strand=Plus/Plus
Query 117273 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCC 117332
|||||| || ||| ||||||||||| || || || || || || |||||| || ||
Sbjct 1145455 GGCAAAGTCGGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACC 1145514
Query 117333 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGA 117391
||||||||||| |||||||| | ||| | || | ||| || | || ||||||||
Sbjct 1145515 GGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCA-AAGGCACCACTGAAGAAGA 1145573
Query 117392 TACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCA 117450
||||||| || || || |||| || |||| || ||||| ||| | |||| |
Sbjct 1145574 TACCCTCGACGGCAGCGAAGGCAACGAGACGCTGAGCAAAGGA-AGAGTCCTTGTCCTGG 1145632
Query 117451 AACCATTTCATTGCCCATTTCGCCTTCTT 117479
| |||| | || ||||| | ||||||||
Sbjct 1145633 ATCCATCTGATAGCCCAGTCGGCCTTCTT 1145661
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589980040399720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |