Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04-
27] 103 sequences; 46,940,970 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq32 104 3e-17
>seq32
Length=3227256
Score = 104 bits (114), Expect = 3e-17
Identities = 321/488 (66%), Gaps = 18/488 (4%)
Strand=Plus/Minus
Query 159304 CAACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTGTTAGCAATCCAAGC-ATACCA 159362
|| || ||| | || | |||||||||| ||| || || || ||| |||| ||||||
Sbjct 2548946 CAGCCCAACTCTGGTGCTCAGGGTGAGTTTGCTGGTCTTCGAGTCATC-AAGCGATACCA 2548888
Query 159363 TCAAGGATCAGGAGA----TGATAAAAGAAATGTATGTTTGATACCAGAGTCAGCACATG 159418
| ||| ||||| ||| || ||| || || | || || | || || || |
Sbjct 2548887 -CGAGGCCAAGGAGGGCGGTGAGAAGCGAACCGTCTGCCTCATCCCCGTCTCCGCCCACG 2548829
Query 159419 GAACTAATCCTGCATCAGCAGTGATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATG 159478
| || || ||||| || | ||||| || ||||| |||||| ||||||| ||||
Sbjct 2548828 GTACCAACCCTGCCAGTGCCGCCATGGCCGGTATGAAGGTTGTACCCATCAAGTGCGATG 2548769
Query 159479 --ATGA-TGGCAACATAGACATCAAAGATCTAGAG---AAGAAAGC-AATCATGAATACA 159531
| || ||| ||| | ||||| | ||||| || ||| || || || | ||
Sbjct 2548768 GCAAGACTGGTAACCTGGACATTGAGGATCTCAAGGCCAAGTGCGCCAAGCACGCTGAC- 2548710
Query 159532 TTTGAACTGTCATGTATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAAC 159591
|| ||| | || ||||| || || || || || |||||| ||||| | |
Sbjct 2548709 ---GAGCTGGCTGCCATCATGATCACCTACCCTTCCACCTTTGGTGTCTTTGAGCCTGAG 2548653
Query 159592 ATCAGACAGATATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCA 159651
||| ||| | || | | || || || ||||||||| || || | || |||||
Sbjct 2548652 GTCAAGCAGGTGTGCGACCTCGTCCACCAGCATGGTGGTCTCGTCTACATGGACGGTGCC 2548593
Query 159652 AATCTAAATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCAT 159711
|| | || || ||| | ||||| | || |||| ||| || ||||| || |||
Sbjct 2548592 AACATGAACGCCCAGATCGGTCTTTGCAGCCCTGGTGATATTGGCGCTGATGTCTGCCAT 2548533
Query 159712 CTAAACTTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCT 159771
|| ||| | || ||||| ||||||||||| || |||||||| || ||||| || ||||||
Sbjct 2548532 CTGAACCTCCACAAGACCTTCTGTATTCCCCACGGAGGTGGTGGCCCTGGTGTTGGTCCT 2548473
Query 159772 ATTGGTGT 159779
|| | |||
Sbjct 2548472 ATCGCTGT 2548465
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588050442884080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |