Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04-
27] 103 sequences; 46,940,970 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq28 102 7e-17
>seq28
Length=4887614
Score = 102 bits (112), Expect = 7e-17
Identities = 423/671 (63%), Gaps = 55/671 (8%)
Strand=Plus/Minus
Query 29760 CAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATC 29819
|||| ||||||| | ||| || | || || || || || || | || || || ||
Sbjct 3688030 CAGTTCGGGAAAGTTGCGGGGTTCACGTTCAAGTTGTGTGTTGAGGGCATCGACATGGTC 3687971
Query 29820 CAGGTAGACGTGAGCGTCTCCCAGGGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGA 29878
|| |||||||| ||||| |||| | ||| | ||| || || ||| | | || ||
Sbjct 3687970 AAGATAGACGTGTGCGTCGCCCATGACGTGAGTCAAGCTG-CCAGGTACCAATTCGCAGA 3687912
Query 29879 CGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCC 29938
|||| |||||||||| || || | | ||||||||| ||||| || || || || || |
Sbjct 3687911 CGTGCGCCATCATGTGTGTCAGCAACGCGTAGCTGGCAATGTTGAACGGAACGCCAAGAC 3687852
Query 29939 CCATGTCCCCCGACCTCTGGTAGAGCTGACA------------------CGAGAGCTC-- 29978
||||||| | || | |||||||||||| || | | |||
Sbjct 3687851 CCATGTCGCAGGATCGCTGGTAGAGCTGGCAGTGTAGGTGGCCTTGGGGCTTGGCCTCGG 3687792
Query 29979 --------TCC-----------GTCGCTCACGTAAAACTGACACATGGTGTGGCACGGAG 30019
||| || | |||||||||||| | ||||||| || |
Sbjct 3687791 GGTCGTCATCCTTTCGTCGGGGGTAGGAGACGTAAAACTGAGCAAACATGTGGCAGGGTG 3687732
Query 30020 GAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTT 30079
| || |||| || || ||||||||||||| | | ||| | || | || |
Sbjct 3687731 GGAGGACCATCTTCTTCAGATCGGCGGGGTTCCAGGCGGAAAGGATCAGACGACGATCGT 3687672
Query 30080 CTGGGTTGTT------CCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATCC 30133
||||||| | | || | | ||||| ||||| || || ||| |
Sbjct 3687671 ATGGGTTGGTGCGCAGCTTGTGAATAATCTCGGCG------AGCTGGTCGACTCCCTGGC 3687618
Query 30134 CCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGT 30193
||| |||||| | | | ||| |||||| || || || |||| ||||||||| ||||
Sbjct 3687617 CCGTGTAGTCCGTCTTGGCGTCGACGTACTCGGCACCAAAGTGCCGCCACTGGAAGCCGT 3687558
Query 30194 ACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTC 30253
|||| || || ||||| || | || | ||| | || || ||||| | || || |
Sbjct 3687557 ACACGGGGCCAAGGTCGCCAACCTCGCGGTGGTTGAGACCGAGGTTGTCGAGGAACTCGC 3687498
Query 30254 TGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTG- 30312
||| || ||| ||||||||||||| | || |||| ||| ||||| ||||
Sbjct 3687497 GGGAGCCATTGCCGTCCCAGATCTTGATGCCGGCCTCGCTGAGGCTAGTGGAGGATGTGT 3687438
Query 30313 GACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTC 30372
||||| || |||||| || ||||| | | ||||| |||||| | ||||||
Sbjct 3687437 TGCCCTC-GATGAACCAGAGGAGCTCGGCGATAACGGCGCGGGTAAAGACGCGCTTGGTG 3687379
Query 30373 GTGAGGAGGGG 30383
|||||||||||
Sbjct 3687378 GTGAGGAGGGG 3687368
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408617087057219
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |