Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04- 27] 103 sequences; 46,940,970 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq37 365 8e-96 seq54 233 4e-56 >seq37 Length=4018383 Score = 365 bits (404), Expect = 8e-96 Identities = 1232/1885 (65%), Gaps = 94/1885 (5%) Strand=Plus/Minus Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612 || || ||||| | ||| |||| ||||||| || || || ||||||||||| ||||| Sbjct 715850 ACAGTGAACTGAATGGGAGCAGCGGCAGCCTGCGTTCGCAGGTAGTACATGCCCGTCTTC 715791 Query 212613 AGGCC---CTTGCCCCAGCCGTGCATGTGCATTGCTG-TGAGTTTCTTCAGCTTAATATT 212668 || || ||| ||||||| | |||||| |||| ||| |||| | || | Sbjct 715790 AGACCGAGCTT---CCAGCCGGCAAAGTGCAT-GCTGGTGA---TCTTGCCC---ATGGT 715741 Query 212669 CTGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGC 212728 |||| | | |||| | ||| || ||||| ||| || ||||| | | Sbjct 715740 GGGGTCCTTCATGTGG---------ATGTTGAGAGACTGGGACTGATCAATGAAGGCACC 715690 Query 212729 CCTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGAT 212788 | ||| || ||||| | | || | | |||||| | |||||||||||||||| ||| Sbjct 715689 TCGGTCGGCTGCCATCTGGACGACCTGGCGCTGGGAAATCTCCCACACGGTCTTGTAGAG 715630 Query 212789 TTCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGT---ATGGT 212845 | |||| || | |||| | |||||||||||| | || || | | ||| | Sbjct 715629 AGCCTTGACCTCAGCGGGGATGTTGGGGATGTTCTGGATGGAACCGTTCTCAGCAATGAT 715570 Query 212846 CAGCTGCAGGCGCATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTG 212905 | | | |||| || ||| |||||| | | || ||||| || Sbjct 715569 TCGGTTCTT---CATGGAATCCGACCACAGGCCCATATCGACGAGATCCTTGAGCAACCA 715513 Query 212906 AGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTA 212965 ||||| || | |||||| || || | ||| || | | |||||| | ||| || ||||| Sbjct 715512 GGGGTTAACGACCTGGAACTCGCCAGCGAGGACACGACGCTGGTAGATGTTGGAGGTGTA 715453 Query 212966 GGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGC 213025 ||||||| || ||||||||| ||||| ||||| | ||||||||| ||||||||||| || Sbjct 715452 AGGCTCGAAGCACTCGTTGTTACCCAGGATCTGCGAAGTGCTGGCAGTGGGCATGGGGGC 715393 Query 213026 CACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTC 213085 | ||| |||||||| | || ||||| || | || || ||||||| Sbjct 715392 AAGCAGCAGACTGTTGCGGGTACCATGCTCCTTGACCTGCTCCCTGAGAGACTCCCAGTC 715333 Query 213086 CCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTT 213145 ||| |||| | |||||||||||||||||| ||||| | || || Sbjct 715332 CCAGAGATCAGAGGG---------CTTCACGTTCCACATGTCGAACTGGAGAATACC--- 715285 Query 213146 GCTCA----CGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGC 213201 |||| | || ||||| | | | ||||| || || | |||||||||||||| || Sbjct 715284 -CTCAGAGGCAGGAGAGCCCTTGAAGGTAGAGTAAGGACCCTCCTCCTTGGCCAGCT-GC 715227 Query 213202 A-GGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTG 213260 | ||| || ||| ||||| | ||||||||| ||||| |||| | |||| |||| || | Sbjct 715226 ACGGAAGCAGTCAGAGCAGCATGGTAGATGGTCTCAAAGATCTGCTTGTTCAGCT-CTCG 715168 Query 213261 -GCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGAC 213319 ||||| || ||| ||| ||||| || |||| |||| || || |||||||| Sbjct 715167 AGCCTCAGGAGACTCGAAAGGCATGCGCAGAGCAAGGAAAGCATCGGCAAGACCCTGGAC 715108 Query 213320 CCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAA 213378 |||| ||| || |||| ||||| || ||| ||| |||| || | |||||| Sbjct 715107 ACCGACGCCAATAGGTCGGTGTCGCATGTTGCTGTTGCGAGCT-TCAGGAACGGGGTAGT 715049 Query 213379 AGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTG-GTGACATGGGCCAGG 213437 ||| || |||||| |||| |||||||| | | | | || ||||| | | ||| Sbjct 715048 GGTTCACATCAATGATCCTGTTCAGGTTGCGAACGAC-AGTCTGTGTGACCTCGTGCAGC 714990 Query 213438 TACTCGTGATTGAACACGTAGC---CCCCGTCCTGC---ACAAACTCAGGCAGGGCGATG 213491 | || | || | |||| || |||| | | || || ||||||| Sbjct 714989 TTCTGG------AAGTCATAGCAGGCCTCGTCATAGTTGATGAAAGAGGGAAGGGCGAGA 714936 Query 213492 CTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCAC 213551 ||| ||||| || || || ||||| | || | | |||||| |||||||| |||||| Sbjct 714935 GAGGCAAGGTTACAGACAGCAACCTCATCAGGGGCACAGTACTCGATGATCTCAGTGCAC 714876 Query 213552 AGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGA-ATC 213610 |||||| || || ||||| |||||||||| ||||| ||| ||| | |||| ||| Sbjct 714875 AGGTTGGAGCTGCGAATGGTACCCAGGTTCTTCTGGTTGCTCTT-GCGGTTGCAGTGATC 714817 Query 213611 CTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCT--CCAG 213668 ||||||||||||| ||||| || ||||| ||| | | | || || ||| |||| Sbjct 714816 CTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCGAGGAT--GGCATACCAG 714759 Query 213669 AGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAG 213728 || | | |||||| | | | ||| | | ||| | ||| |||| ||||| Sbjct 714758 AGCTTCTGGGCCTTCATGGTCTTGC-GACCCTTGCCGGCCTT--CTCATACTTCTCGTAC 714702 Query 213729 AGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATG 213788 || | | ||| || | || || | | || || ||||| ||||||||| Sbjct 714701 AGAGCCTCGAACTCCTCACCGTAGCAGTCGGCGAGACCGGGACACTCGTTGGGACACATC 714642 Query 213789 AGGCTCCAGTCCCCGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGC 213847 || ||||||| |||| | |||| ||| | || |||||| || || || | ||| || || Sbjct 714641 AGAGTCCAGTCACCGTTCTTCTC-GACACGCTTCATGAAGAGATCGGGAATCCAGAGAGC 714583 Query 213848 GGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAA 213907 ||||| ||| | | | ||| ||| || ||| |||||||| || || || Sbjct 714582 CAGGAACAAGTCGCGAGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAA 714523 Query 213908 GTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTT 213964 ||||||| || |||||||| ||||| | |||||||||||| || || | || | || Sbjct 714522 CTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAAGCACCAGGTCGCTTGTT 714463 Query 213965 GCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAG--GACGGGTACCAGC 214022 ||| ||||| || || | ||| ||||||||| || || | ||||| || Sbjct 714462 GCCACCCTGATCGACGTATCGGGCAGTGTTGTTGAAGACACGAAGCATAGGGGTAACA-- 714405 Query 214023 CCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCA--GGTTGCTCA 214080 |||||||| |||||||| || || || || ||||| | ||| | | | ||| | Sbjct 714404 CCGTTGGAGGTACCGTTGGTACCGGCGATGTAGGAGCCAGTGGCACGGATTCGGTGCACG 714345 Query 214081 TGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCA 214140 | ||| || || ||||| || |||||| |||||||| ||| | | | ||| || Sbjct 714344 TTCAGA--CCAATACCACCAGCCATCTTGGAAATCATGGCACAGGTCTTGAGAGTATCAT 714287 Query 214141 TGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCC 214200 || || | || ||||| || | | || | | |||||| |||||||| ||| Sbjct 714286 AAATACCCTCAATACTGTCCTCCTTCATGTCGACAAGGAAGCATGAGGAGAGCTGAGGCT 714227 Query 214201 TGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGA 214260 || | || | ||||| || |||||| ||||||| | | |||||| | || | || Sbjct 714226 GGGGAGTACCCGCATTGAAGAGGGTGGGGGAGGCATGGGTGAAGAACTTGCTCGACATGA 714167 Query 214261 GCCTGTAGGTCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCACCTCA 214320 | |||| ||||| ||||| |||| || ||| | ||| | || Sbjct 714166 GGTTGTAAGTCTCGAGGACACGCTCAATGTTGTCACCCCAGATGCCGACAGCAACACGCA 714107 Query 214321 TCAGCATGTGCTGGGGCCTCTCTATGGGTCCTTTGGGGCC---CTTGAGCAGGTAGGAGC 214377 | | |||||||||||| | ||| | || ||| | |||||| |||||||| | Sbjct 714106 TGATCATGTGCTGGGGGCGCTC-AACAATC--TTGCCATCAATCTTGAGGAGGTAGGATC 714050 Query 214378 GCTCCAGAGTCTTGAACCCAAAGTA 214402 |||| ||||||||||| |||||||| Sbjct 714049 GCTCAAGAGTCTTGAAGCCAAAGTA 714025 >seq54 Length=1261221 Score = 233 bits (258), Expect = 4e-56 Identities = 493/729 (68%), Gaps = 11/729 (2%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| || || | ||||| |||||||| ||||| || ||| ||||||||||| Sbjct 1145164 CTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCCAGGGAGATGTTCTC 1145223 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCA 47957 ||||||| ||||||||||| | || || ||| | || ||||| | || | Sbjct 1145224 CATGAAGTCGAAGGGGTTGGCAGACTTGTAGACCT-TCTCGTTGCCCAGGGCGACGAGGA 1145282 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 | | || |||||| |||||||||| | ||||||| || ||||||||| | ||||| Sbjct 1145283 GACGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTTGGCGTTCATGCCGAGGAGGG 1145342 Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077 ||| | ||||| || || ||||||| ||| || ||||| || | || | Sbjct 1145343 CGCAGGGGAGAGCCTCAGTCAGGAACTCCTGCTCAATGGTGACGGCATCAGTGATGATGT 1145402 Query 48078 GCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAA 48137 || | | || || || | || | | | | || | ||| | |||||||| Sbjct 1145403 CCTGGATGATCTGCT-TGCTGGCACG--GCCCTTGAGGTGGGAGTGGAGGAGGCAGGCAA 1145459 Query 48138 AGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCA 48197 |||| |||| | || || || || ||||||| ||||||||||| ||||| |||| Sbjct 1145460 AGTCGGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCGGGCA 1145519 Query 48198 TGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCT 48257 ||| || | || ||||||||||| || | || || | ||| ||||||||| |||| Sbjct 1145520 TGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCACCACTGAAGAAGATACCCT 1145579 Query 48258 CCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGG 48317 | || || ||||| || ||| | || | || |||| || |||||| |||||| Sbjct 1145580 CGACGGCAGCGAAGGCAACGAGACGCTGAGCAAAGGAAGAGTCCTTGTCCTGGATCCATC 1145639 Query 48318 AAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCT 48377 | |||||||| |||||||| |||||| || || ||||| ||||| |||||| | Sbjct 1145640 TGATAGCCCAGTCGGCCTTCTTGCGGATGCAAGGGATGGTCTCAATGGCGTTGAAGAGAT 1145699 Query 48378 TCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGTACATCTCAG 48434 | | || | | ||| | ||||| | ||||||| | ||| |||| | Sbjct 1145700 AGGTTCGCTGAGAAGGCTCCTTGATGTAGGTGTCAATGAGCAG---GGAGTAGGTCTCGG 1145756 Query 48435 AGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCA 48494 |||| | ||||| || ||||||||| ||||||||| | ||||| | ||| | Sbjct 1145757 AGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGAGCCTCGGGGATCTGAA 1145816 Query 48495 CTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGA 48554 | || | ||||| ||| | |||||||| ||||| || || || || || || |||| Sbjct 1145817 CCTCGCCGCTGAATCGCTCAACAAGATTCTCGTTGACGATGCCGTCAGAGGCGGCGAAGA 1145876 Query 48555 AGGCAAGGA 48563 ||||||||| Sbjct 1145877 AGGCAAGGA 1145885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931531600651520