Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04-
27] 103 sequences; 46,940,970 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq37 365 8e-96
seq54 233 4e-56
>seq37
Length=4018383
Score = 365 bits (404), Expect = 8e-96
Identities = 1232/1885 (65%), Gaps = 94/1885 (5%)
Strand=Plus/Minus
Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612
|| || ||||| | ||| |||| ||||||| || || || ||||||||||| |||||
Sbjct 715850 ACAGTGAACTGAATGGGAGCAGCGGCAGCCTGCGTTCGCAGGTAGTACATGCCCGTCTTC 715791
Query 212613 AGGCC---CTTGCCCCAGCCGTGCATGTGCATTGCTG-TGAGTTTCTTCAGCTTAATATT 212668
|| || ||| ||||||| | |||||| |||| ||| |||| | || |
Sbjct 715790 AGACCGAGCTT---CCAGCCGGCAAAGTGCAT-GCTGGTGA---TCTTGCCC---ATGGT 715741
Query 212669 CTGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGC 212728
|||| | | |||| | ||| || ||||| ||| || ||||| | |
Sbjct 715740 GGGGTCCTTCATGTGG---------ATGTTGAGAGACTGGGACTGATCAATGAAGGCACC 715690
Query 212729 CCTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGAT 212788
| ||| || ||||| | | || | | |||||| | |||||||||||||||| |||
Sbjct 715689 TCGGTCGGCTGCCATCTGGACGACCTGGCGCTGGGAAATCTCCCACACGGTCTTGTAGAG 715630
Query 212789 TTCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGT---ATGGT 212845
| |||| || | |||| | |||||||||||| | || || | | ||| |
Sbjct 715629 AGCCTTGACCTCAGCGGGGATGTTGGGGATGTTCTGGATGGAACCGTTCTCAGCAATGAT 715570
Query 212846 CAGCTGCAGGCGCATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTG 212905
| | | |||| || ||| |||||| | | || ||||| ||
Sbjct 715569 TCGGTTCTT---CATGGAATCCGACCACAGGCCCATATCGACGAGATCCTTGAGCAACCA 715513
Query 212906 AGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTA 212965
||||| || | |||||| || || | ||| || | | |||||| | ||| || |||||
Sbjct 715512 GGGGTTAACGACCTGGAACTCGCCAGCGAGGACACGACGCTGGTAGATGTTGGAGGTGTA 715453
Query 212966 GGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGC 213025
||||||| || ||||||||| ||||| ||||| | ||||||||| ||||||||||| ||
Sbjct 715452 AGGCTCGAAGCACTCGTTGTTACCCAGGATCTGCGAAGTGCTGGCAGTGGGCATGGGGGC 715393
Query 213026 CACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTC 213085
| ||| |||||||| | || ||||| || | || || |||||||
Sbjct 715392 AAGCAGCAGACTGTTGCGGGTACCATGCTCCTTGACCTGCTCCCTGAGAGACTCCCAGTC 715333
Query 213086 CCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTT 213145
||| |||| | |||||||||||||||||| ||||| | || ||
Sbjct 715332 CCAGAGATCAGAGGG---------CTTCACGTTCCACATGTCGAACTGGAGAATACC--- 715285
Query 213146 GCTCA----CGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGC 213201
|||| | || ||||| | | | ||||| || || | |||||||||||||| ||
Sbjct 715284 -CTCAGAGGCAGGAGAGCCCTTGAAGGTAGAGTAAGGACCCTCCTCCTTGGCCAGCT-GC 715227
Query 213202 A-GGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTG 213260
| ||| || ||| ||||| | ||||||||| ||||| |||| | |||| |||| || |
Sbjct 715226 ACGGAAGCAGTCAGAGCAGCATGGTAGATGGTCTCAAAGATCTGCTTGTTCAGCT-CTCG 715168
Query 213261 -GCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGAC 213319
||||| || ||| ||| ||||| || |||| |||| || || ||||||||
Sbjct 715167 AGCCTCAGGAGACTCGAAAGGCATGCGCAGAGCAAGGAAAGCATCGGCAAGACCCTGGAC 715108
Query 213320 CCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAA 213378
|||| ||| || |||| ||||| || ||| ||| |||| || | ||||||
Sbjct 715107 ACCGACGCCAATAGGTCGGTGTCGCATGTTGCTGTTGCGAGCT-TCAGGAACGGGGTAGT 715049
Query 213379 AGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTG-GTGACATGGGCCAGG 213437
||| || |||||| |||| |||||||| | | | | || ||||| | | |||
Sbjct 715048 GGTTCACATCAATGATCCTGTTCAGGTTGCGAACGAC-AGTCTGTGTGACCTCGTGCAGC 714990
Query 213438 TACTCGTGATTGAACACGTAGC---CCCCGTCCTGC---ACAAACTCAGGCAGGGCGATG 213491
| || | || | |||| || |||| | | || || |||||||
Sbjct 714989 TTCTGG------AAGTCATAGCAGGCCTCGTCATAGTTGATGAAAGAGGGAAGGGCGAGA 714936
Query 213492 CTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCAC 213551
||| ||||| || || || ||||| | || | | |||||| |||||||| ||||||
Sbjct 714935 GAGGCAAGGTTACAGACAGCAACCTCATCAGGGGCACAGTACTCGATGATCTCAGTGCAC 714876
Query 213552 AGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGA-ATC 213610
|||||| || || ||||| |||||||||| ||||| ||| ||| | |||| |||
Sbjct 714875 AGGTTGGAGCTGCGAATGGTACCCAGGTTCTTCTGGTTGCTCTT-GCGGTTGCAGTGATC 714817
Query 213611 CTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCT--CCAG 213668
||||||||||||| ||||| || ||||| ||| | | | || || ||| ||||
Sbjct 714816 CTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCGAGGAT--GGCATACCAG 714759
Query 213669 AGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAG 213728
|| | | |||||| | | | ||| | | ||| | ||| |||| |||||
Sbjct 714758 AGCTTCTGGGCCTTCATGGTCTTGC-GACCCTTGCCGGCCTT--CTCATACTTCTCGTAC 714702
Query 213729 AGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATG 213788
|| | | ||| || | || || | | || || ||||| |||||||||
Sbjct 714701 AGAGCCTCGAACTCCTCACCGTAGCAGTCGGCGAGACCGGGACACTCGTTGGGACACATC 714642
Query 213789 AGGCTCCAGTCCCCGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGC 213847
|| ||||||| |||| | |||| ||| | || |||||| || || || | ||| || ||
Sbjct 714641 AGAGTCCAGTCACCGTTCTTCTC-GACACGCTTCATGAAGAGATCGGGAATCCAGAGAGC 714583
Query 213848 GGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAA 213907
||||| ||| | | | ||| ||| || ||| |||||||| || || ||
Sbjct 714582 CAGGAACAAGTCGCGAGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAA 714523
Query 213908 GTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTT 213964
||||||| || |||||||| ||||| | |||||||||||| || || | || | ||
Sbjct 714522 CTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAAGCACCAGGTCGCTTGTT 714463
Query 213965 GCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAG--GACGGGTACCAGC 214022
||| ||||| || || | ||| ||||||||| || || | ||||| ||
Sbjct 714462 GCCACCCTGATCGACGTATCGGGCAGTGTTGTTGAAGACACGAAGCATAGGGGTAACA-- 714405
Query 214023 CCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCA--GGTTGCTCA 214080
|||||||| |||||||| || || || || ||||| | ||| | | | ||| |
Sbjct 714404 CCGTTGGAGGTACCGTTGGTACCGGCGATGTAGGAGCCAGTGGCACGGATTCGGTGCACG 714345
Query 214081 TGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCA 214140
| ||| || || ||||| || |||||| |||||||| ||| | | | ||| ||
Sbjct 714344 TTCAGA--CCAATACCACCAGCCATCTTGGAAATCATGGCACAGGTCTTGAGAGTATCAT 714287
Query 214141 TGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCC 214200
|| || | || ||||| || | | || | | |||||| |||||||| |||
Sbjct 714286 AAATACCCTCAATACTGTCCTCCTTCATGTCGACAAGGAAGCATGAGGAGAGCTGAGGCT 714227
Query 214201 TGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGA 214260
|| | || | ||||| || |||||| ||||||| | | |||||| | || | ||
Sbjct 714226 GGGGAGTACCCGCATTGAAGAGGGTGGGGGAGGCATGGGTGAAGAACTTGCTCGACATGA 714167
Query 214261 GCCTGTAGGTCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCACCTCA 214320
| |||| ||||| ||||| |||| || ||| | ||| | ||
Sbjct 714166 GGTTGTAAGTCTCGAGGACACGCTCAATGTTGTCACCCCAGATGCCGACAGCAACACGCA 714107
Query 214321 TCAGCATGTGCTGGGGCCTCTCTATGGGTCCTTTGGGGCC---CTTGAGCAGGTAGGAGC 214377
| | |||||||||||| | ||| | || ||| | |||||| |||||||| |
Sbjct 714106 TGATCATGTGCTGGGGGCGCTC-AACAATC--TTGCCATCAATCTTGAGGAGGTAGGATC 714050
Query 214378 GCTCCAGAGTCTTGAACCCAAAGTA 214402
|||| ||||||||||| ||||||||
Sbjct 714049 GCTCAAGAGTCTTGAAGCCAAAGTA 714025
>seq54
Length=1261221
Score = 233 bits (258), Expect = 4e-56
Identities = 493/729 (68%), Gaps = 11/729 (2%)
Strand=Plus/Plus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
||||||||| || || | ||||| |||||||| ||||| || ||| |||||||||||
Sbjct 1145164 CTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCCAGGGAGATGTTCTC 1145223
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCA 47957
||||||| ||||||||||| | || || ||| | || ||||| | || |
Sbjct 1145224 CATGAAGTCGAAGGGGTTGGCAGACTTGTAGACCT-TCTCGTTGCCCAGGGCGACGAGGA 1145282
Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017
| | || |||||| |||||||||| | ||||||| || ||||||||| | |||||
Sbjct 1145283 GACGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTTGGCGTTCATGCCGAGGAGGG 1145342
Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077
||| | ||||| || || ||||||| ||| || ||||| || | || |
Sbjct 1145343 CGCAGGGGAGAGCCTCAGTCAGGAACTCCTGCTCAATGGTGACGGCATCAGTGATGATGT 1145402
Query 48078 GCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAA 48137
|| | | || || || | || | | | | || | ||| | ||||||||
Sbjct 1145403 CCTGGATGATCTGCT-TGCTGGCACG--GCCCTTGAGGTGGGAGTGGAGGAGGCAGGCAA 1145459
Query 48138 AGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCA 48197
|||| |||| | || || || || ||||||| ||||||||||| ||||| ||||
Sbjct 1145460 AGTCGGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCGGGCA 1145519
Query 48198 TGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCT 48257
||| || | || ||||||||||| || | || || | ||| ||||||||| ||||
Sbjct 1145520 TGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCACCACTGAAGAAGATACCCT 1145579
Query 48258 CCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGG 48317
| || || ||||| || ||| | || | || |||| || |||||| ||||||
Sbjct 1145580 CGACGGCAGCGAAGGCAACGAGACGCTGAGCAAAGGAAGAGTCCTTGTCCTGGATCCATC 1145639
Query 48318 AAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCT 48377
| |||||||| |||||||| |||||| || || ||||| ||||| |||||| |
Sbjct 1145640 TGATAGCCCAGTCGGCCTTCTTGCGGATGCAAGGGATGGTCTCAATGGCGTTGAAGAGAT 1145699
Query 48378 TCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGTACATCTCAG 48434
| | || | | ||| | ||||| | ||||||| | ||| |||| |
Sbjct 1145700 AGGTTCGCTGAGAAGGCTCCTTGATGTAGGTGTCAATGAGCAG---GGAGTAGGTCTCGG 1145756
Query 48435 AGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCA 48494
|||| | ||||| || ||||||||| ||||||||| | ||||| | ||| |
Sbjct 1145757 AGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGAGCCTCGGGGATCTGAA 1145816
Query 48495 CTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGA 48554
| || | ||||| ||| | |||||||| ||||| || || || || || || ||||
Sbjct 1145817 CCTCGCCGCTGAATCGCTCAACAAGATTCTCGTTGACGATGCCGTCAGAGGCGGCGAAGA 1145876
Query 48555 AGGCAAGGA 48563
|||||||||
Sbjct 1145877 AGGCAAGGA 1145885
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931531600651520
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