Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04-
27] 103 sequences; 46,940,970 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq37 297 4e-75
seq54 226 5e-54
>seq37
Length=4018383
Score = 297 bits (328), Expect = 4e-75
Identities = 857/1287 (67%), Gaps = 65/1287 (5%)
Strand=Plus/Minus
Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGG 221475
||||| ||||| ||||||||||||||||||||| |||||| || |||| | ||||| ||
Sbjct 715217 GTCAGAGCAGCATGGTAGATGGTCTCAAAGATCTGCTTGTTCAG-CTCTCGAGCCTCAGG 715159
Query 221476 AGAAGTGAAGGGCATACGCAGCATCT--GAAAGACGTCGGCCAGTCCCTGTACTCCGATA 221533
||| ||| ||||| ||||| | | ||||| | ||||| || ||||| || ||||
Sbjct 715158 AGACTCGAAAGGCATGCGCAG-AGCAAGGAAAG-CATCGGCAAGACCCTGGACACCGACG 715101
Query 221534 CCGATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGA 221591
|| || || | ||||| | ||||| | ||| ||||| || ||||| || ||| |
Sbjct 715100 CCAATAGGTCGGTGTCGCATGTTGCTGTTGCGA--GCTTCAGGAACGGGGTAGTGGTTCA 715043
Query 221592 CGTCGATCAGATTGTTGAGGTTCAGAGTGAT-GACTTTAACCACCTCGGTCAGCTTCTGG 221650
| || || | |||| ||||| || || | || | |||||| ||||||||||
Sbjct 715042 CATCAATGATCCTGTTCAGGTTGCGAACGACAGTCTGTGTG-ACCTCGTGCAGCTTCTGG 714984
Query 221651 ---TGATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCA 221707
| || | | || || | | || || | |||| | |||||
Sbjct 714983 AAGTCATAGCAGGCCT------CGTCATAGTTGATG---------AAAGAGGGAAGGGCG 714939
Query 221708 ACGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTA 221767
| ||| |||||||| || || ||||| || | |||| |||||||| ||
Sbjct 714938 AGAGAGGCAAGGTTACAGACAGCAACCTCATCAGGGGCACAGTACTCGATGATCTCAGTG 714879
Query 221768 CAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCG 221827
|| |||||| || ||||| ||||||| || || || |||||| ||| ||| |
Sbjct 714878 CACAGGTTGGAGCTGCGAATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTG-CAGTG 714820
Query 221828 -TCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCA 221886
|||||||||||||| ||||| |||||||| ||||||| | || || | |||
Sbjct 714819 ATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCGAGGATGGCATACCA 714760
Query 221887 GAGTTCTCTGGCGCTCACCGTCCTCTTGACTGCACCCT---CGGTCTTTTCATAC--CCG 221941
||| | ||||| || | | ||||| ||||| ||| ||| |||||| |
Sbjct 714759 GAGCT-TCTGGGCCTT--CATGGTCTTGCG---ACCCTTGCCGGCCTTCTCATACTTCTC 714706
Query 221942 GTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGA 222001
||| ||||| | | |||| |||||||| ||| | || || |||||| | ||||
Sbjct 714705 GTACAGAGCCT--CGAACTCCTCACCGTAGCAGTCGGCGAGACCGGGACACTCGTTGGGA 714648
Query 222002 CACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCAC 222061
||||||||| |||||| ||| | | ||| | || ||||||||| || || |||||
Sbjct 714647 CACATCAGAGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAAGAGATCGGGAATCCAG 714588
Query 222062 AGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCC 222121
|| ||| | || | || | | || ||| ||| ||||| ||| || | ||| ||
Sbjct 714587 AGAGCCAGGAACAAGTCGCGAGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGCAGGTCA 714528
Query 222122 AAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGC 222181
| |||||||| | || |||||||| ||||| || |||| ||| | ||| || ||||||
Sbjct 714527 AGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAAGCACCAGGTCGC 714468
Query 222182 TTGTTGCCACCCTGATCCAC-CATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGT--CGG 222237
||||||||||||||||| || ||| ||| | |||||||| ||||| | ||
Sbjct 714467 TTGTTGCCACCCTGATCGACGTATC--GGGCAGTGTTGTTGAAGACACGAAGCATAGGGG 714410
Query 222238 TACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTT 222297
|| || |||||||| ||||||||| || ||||| | || ||| | || |
Sbjct 714409 TAACA--CCGTTGGAGGTACCGTTGGTACCGGCGATGTAGGAGCCAGTGGCAC---GGAT 714355
Query 222298 ACTG-GCA--GACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAG 222354
| | ||| || || |||||||| || || || |||||||| ||| |||||||
Sbjct 714354 TCGGTGCACGTTCAGACCAATACCACCAGCCATCTTGGAAATCATGGCACAGGTCTTGAG 714295
Query 222355 AGTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACAT 222414
||| || || ||||| ||| ||||||||| | || | || || || || || |
Sbjct 714294 AGTATCATAAATACCCTCAATACTGTCCTCCTTCATGTCGACAAGGAAGCATGAGGAGAG 714235
Query 222415 CTGAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCT 222474
||||| | || | || || || || || ||||| ||| || || ||| | ||
Sbjct 714234 CTGAGGCTGGGGAGTACCCGCATTGAAGAGGGTGGGGGAGGCATGGGTGAAGAACTTGCT 714175
Query 222475 AGACATCAGATCGTACGTCTCTACGACTCTGGCGATGTTGTC-CCCGTGAATCTGCATGG 222533
||||| || | ||| ||||| | ||| | | |||||||| ||| || | | | |
Sbjct 714174 CGACATGAGGTTGTAAGTCTCGAGGACACGCTCAATGTTGTCACCCCAGATGCCG-ACAG 714116
Query 222534 CGCATCTCATGTACATGTACTGGGGCCTCTCCACAGGACCCTTGGAGC--TGGAGAGCAG 222591
| | |||| ||||| |||||| | ||| ||| | | | | | | ||| ||
Sbjct 714115 CAACACGCATGATCATGTGCTGGGGGCGCTCAACA--ATCTTGCCATCAATCTTGAGGAG 714058
Query 222592 GTACGATTTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAAC 222651
||| ||| || ||||||||||| |||||||| | | | ||||| | | | | ||
Sbjct 714057 GTAGGATCGCTCAAGAGTCTTGAAGCCAAAGTATTGGTATTGGAAGTCACGGTCATAGAC 713998
Query 222652 CACGGCGGCGTCCAGCTCCGACTTGTG 222678
| ||||| ||| |||||| ||||||
Sbjct 713997 AATGGCGGAGTCTAGCTCCTCCTTGTG 713971
Score = 113 bits (124), Expect = 8e-20
Identities = 106/135 (79%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175
||| || || ||||| || || | ||| || | | |||||| | ||| || ||| | ||
Sbjct 715509 GTTAACGACCTGGAACTCGCCAGCGAGGACACGACGCTGGTAGATGTTGGAGGTGTAAGG 715450
Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCAC 221235
|||| || ||||||||| ||||||||||| | |||||||| ||||||||||| || |
Sbjct 715449 CTCGAAGCACTCGTTGTTACCCAGGATCTGCGAAGTGCTGGCAGTGGGCATGGGGGCAAG 715390
Query 221236 CAGCAGACTGTTGCG 221250
|||||||||||||||
Sbjct 715389 CAGCAGACTGTTGCG 715375
>seq54
Length=1261221
Score = 226 bits (250), Expect = 5e-54
Identities = 568/857 (66%), Gaps = 24/857 (3%)
Strand=Plus/Minus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536
|| ||| |||||||||||||||| | ||| |||||| ||||| ||||||||||||
Sbjct 1146009 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCCGAGGAGATTGATCTG 1145950
Query 25537 GCCAAGGACATGGACGGCTGGTAC----GCTCTATCCAAAGACGAGCAGCATTTTCTCAA 25592
||||||| | ||| |||| || || || || ||||||||| || ||
Sbjct 1145949 TCCAAGGATCTCCACGACTGGAACAACCGC-CTGACCTCTGACGAGCAGTTCTTCATCTC 1145891
Query 25593 GTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAG 25652
|| | | || ||||| || |||||||| || || || ||||||||||| ||| |
Sbjct 1145890 TCACATCCTTGCCTTCTTCGCCGCCTCTGACGGCATCGTCAACGAGAATCTTGTTGAGCG 1145831
Query 25653 ATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCAT 25712
||||| | | || || ||| | ||||| || |||||||| |||||||| ||
Sbjct 1145830 ATTCAGCGGCGAGGTTCAGATCCCCGAGGCTCGATGCTTCTACGGCTTCCAGATCATGAT 1145771
Query 25713 CGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGA--CGTC 25770
|| || | ||||| ||| || || ||| | || ||||| | || | ||
Sbjct 1145770 GGAGAACATCCACTCCGAGACCTACTCCCTGCTCATTGACACCTACATCAAGGAGCCTTC 1145711
Query 25771 GCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCG 25830
| | || | | || || ||||| ||| ||| || ||||| | ||||||
Sbjct 1145710 TCAGCGA-ACCTAT-CTCTTCAACGCCATTGAGACCATCCCTTGCATCCGCAAGAAGGCC 1145653
Query 25831 CGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCC 25890
||||| || | |||||| | | || | || | |||| |||| || || |||
Sbjct 1145652 GACTGGGCTATCAGATGGATCCAGGACAAGGACTCTTCCTTTGCTCAGCGTCTCGTTGCC 1145593
Query 25891 TTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAG 25950
|| ||||| || ||||| ||||| ||||| ||| | ||||| |||||||||||||||||
Sbjct 1145592 TTCGCTGCCGTCGAGGGTATCTTCTTCAGTGGTGCCTTTGCTTCCATCTTCTGGCTCAAG 1145533
Query 25951 CAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGT 26010
|| || ||||||||| ||| ||| ||||||||||||||| | || ||||||
Sbjct 1145532 AAGCGTGGTCTCATGCCCGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTGATGAGGGT 1145473
Query 26011 CTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTC--TC 26068
|| |||| || ||||||||||| ||| || | |||| ||| | | | | |
Sbjct 1145472 CTTCACACCGACTTTGCCTGCCTCCTCCACTC---CCAC---CTCAAGGGCCGTGCCAGC 1145419
Query 26069 AAG-AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNN 26127
||| ||| | || | ||||||| || || || || ||| ||||||| |
Sbjct 1145418 AAGCAGATCATCCAGGACATCATCACTGATGCCGTCACCATTGAGCAGGAGTTCCTGACT 1145359
Query 26128 NNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGAG 26187
| ||||||||| || ||||||| || ||||| |||
Sbjct 1145358 GAGGCTCTCCCCTGCGCCCTCCTCGGCATGAACGCCAACCTCATGAAGCAGTACATCGAG 1145299
Query 26188 TATGTGGCCGACCATCTGCT-GT-GCCAGCTGGGACTCGCCAGACTCTAC-AGTACGCCT 26244
| || ||||||| ||| || || ||| ||||| || | ||||| ||| |||
Sbjct 1145298 TTCGTCGCCGACCGTCTCCTCGTCGCC--CTGGGCAACGAGAAGGTCTACAAGTCTGCC- 1145242
Query 26245 AACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAG 26304
||||| |||||||| ||||| ||||| || ||| || |||||||||||||| || |||
Sbjct 1145241 AACCCCTTCGACTTCATGGAGAACATCTCCCTGGGTGGCAAGACCAACTTCTTCGAGAAG 1145182
Query 26305 AGGGTCGGCGACTATCA 26321
| ||||| ||||| ||
Sbjct 1145181 CGTGTCGGTGACTACCA 1145165
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928843604112320
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