Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04-
27] 103 sequences; 46,940,970 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq32 113 5e-20
>seq32
Length=3227256
Score = 113 bits (124), Expect = 5e-20
Identities = 323/488 (66%), Gaps = 18/488 (4%)
Strand=Plus/Plus
Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242
||| | |||||||| || ||||| || |||||||| || ||||||||||| ||||| ||
Sbjct 2548465 ACAGCGATAGGACCAACACCAGGGCCACCACCTCCGTGGGGAATACAGAAGGTCTTGTGG 2548524
Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302
| || ||||| || ||||| || ||| |||| || | ||||| | ||| ||
Sbjct 2548525 AGGTTCAGATGGCAGACATCAGCGCCAATATCACCAGGGCTGCAAAGACCGATCTGGGCG 2548584
Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362
|| | || ||||| || | || || ||||||||| | || |||| | || | |
Sbjct 2548585 TTCATGTTGGCACCGTCCATGTAGACGAGACCACCATGCTGGTGGACGAGGTCGCACACC 2548644
Query 138363 TGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGAG 138422
|| ||| | | ||||| |||||| || || || || || ||||| || |
Sbjct 2548645 TGCTTGACCTCAGGCTCAAAGACACCAAAGGTGGAAGGGTAGGTGATCATGATGGCAGCC 2548704
Query 138423 AGTTCAAATGTATTCATGATT-GCTTTCTT---CTCTAGATCTTTGATGTCTATGTTGCC 138478
|| || || | || || || ||| || ||||| | ||||| | ||| ||
Sbjct 2548705 AGCTC----GTCAGCGTGCTTGGCGCACTTGGCCTTGAGATCCTCAATGTCCAGGTTACC 2548760
Query 138479 A-TCAT--CATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGG 138535
| || | |||| ||||||| |||||| ||||| || |||||| | ||||| |||||
Sbjct 2548761 AGTCTTGCCATCGCACTTGATGGGTACAACCTTCATACCGGCCATGGCGGCACTGGCAGG 2548820
Query 138536 ATTAGTTCCATGTGCTGACTCTGGTATCAGACATACATTTCTTTTATCA----TCTCCTG 138591
|| || || || || || | || || || || || ||| || ||| |||||
Sbjct 2548821 GTTGGTACCGTGGGCGGAGACGGGGATGAGGCAGACGGTTCGCTTCTCACCGCCCTCCTT 2548880
Query 138592 ATCCTTGATGATAT-GCTTGGATTGCTAACAGTCCTGCATACTCACCCTGTGATCCTGCG 138650
||| | || ||| |||| ||| || || || ||| |||||||||| | || | |
Sbjct 2548881 GGCCTCG-TGGTATCGCTT-GATGACTCGAAGACCAGCAAACTCACCCTGAGCACCAGAG 2548938
Query 138651 TTAGGTTG 138658
|| || ||
Sbjct 2548939 TTGGGCTG 2548946
Score = 111 bits (122), Expect = 2e-19
Identities = 156/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 139294 CAGACATATTTGCGAGCAGTGCTTGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTC 139353
||||||| || || || || || || || ||||||||||| ||||| || || |||| |
Sbjct 2549642 CAGACATGTTGGCCAGAAGAGCCTGGGCGGTGCAGATGTTGCTGGTGGCCTTTTCTCGGC 2549701
Query 139354 TAATATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTCCA 139413
||| |||||||| | || || || || | | | ||||| ||||| | ||||
Sbjct 2549702 GAATGTGCTGCTCACGGGTCTGAAGAGCGAGACGGAGAGCAGGCTTGCCGAGTCGGTCCT 2549761
Query 139414 CTGACTGACCTACAATTCTGCCAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGA 139473
|| ||| |||| | || || ||||| | ||| ||||| || | || || ||||
Sbjct 2549762 TGGAAACACCAACAAGACGACCGGGGATCTTGCGCTTGTACTTCTCCGAAGTAGCGAAGA 2549821
Query 139474 ATGCAGCATGAGGACCTCCGTATCCCATAGGAATACCAA 139512
| || ||||||||||| ||||| |||| ||||| |||||
Sbjct 2549822 AGGCGGCATGAGGACCACCGTAGCCCAGAGGAACACCAA 2549860
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578997654539560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |