Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04-
27] 103 sequences; 46,940,970 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq32 96.9 3e-15
seq41 82.4 7e-11
>seq32
Length=3227256
Score = 96.9 bits (106), Expect = 3e-15
Identities = 148/210 (70%), Gaps = 1/210 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || || || || || || || || || || || || ||| |
Sbjct 1807627 ATGCAGATCTTTGTCAAGACTCTCACAGGAAAGACCATCACTCTGGAGGTCGAGTCCAGC 1807568
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || || ||||| || ||||| || || || || ||||| ||
Sbjct 1807567 GATACCATTGATAATGTGAAGTCCAAGATTCAGGACAAGGAGGGTATCCC-CCCGACCAG 1807509
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || | |||||||| || || ||||||||||| | | | | || || || |||
Sbjct 1807508 CAGCGACTTATCTTTGCTGGTAAGCAGCTGGAGGACGGTCGCACCCTCTCTGACTACAAC 1807449
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913
||||| ||||||||||| || ||| | |||
Sbjct 1807448 ATTCAGAAGGAATCGACCCTGCACCTTGTG 1807419
>seq41
Length=1307349
Score = 82.4 bits (90), Expect = 7e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| | || || || || || || ||||| || || || || || | |
Sbjct 954554 GATGCAGATCTTCGTCAAGACCCTTACGGGGAAGACTATCACCCTTGAGGTGGAGTCTTC 954495
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|||||| | || | || || |||||||| ||||| || || || || ||||| ||
Sbjct 954494 CGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCA 954435
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| || | |||||||| || || ||||| |||||| | | | || || || ||
Sbjct 954434 GCAGCGACTTATCTTTGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAA 954375
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||| || ||||| || || ||| |||| | || |||| || ||
Sbjct 954374 CATCCAGAAGGAGAGCACTCTCCACCTGGTCCTCCGCCTGCGTGGTGG 954327
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449897020756840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |