Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04-
27] 103 sequences; 46,940,970 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq54 154 2e-31
seq37 125 1e-22
>seq54
Length=1261221
Score = 154 bits (170), Expect = 2e-31
Identities = 237/333 (71%), Gaps = 15/333 (5%)
Strand=Plus/Plus
Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399
||| || || ||| ||| | |||||| ||| || ||||||||||| || |||||
Sbjct 1145473 ACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCGGGCATGAGACCACGCTT 1145532
Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGA--GAAAAAGATGCCCTCGACGGCGGCA 794457
||||||||| ||||||| | | || || | | ||| ||||| ||||||||||| ||
Sbjct 1145533 CTTGAGCCAGAAGATGGAA--GCAAAGGCACCACTGAAGAAGATACCCTCGACGGCAGCG 1145590
Query 794458 AAGCCGACGAGCCGCTCGGCAAA---AGTGTCCAGGCCCTCTTTGTTGATCCACTTCATC 794514
||| | ||||| |||| ||||| || |||| | ||| |||||| | ||
Sbjct 1145591 AAGGCAACGAGACGCTGAGCAAAGGAAGAGTCCTTGTCCTG------GATCCATCTGATA 1145644
Query 794515 GCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGT-GGTC 794573
||||| || ||||| || | | | || | || || |||||| ||||| | |||
Sbjct 1145645 GCCCAGTCGGCCTTCTTGCGGATGCAAGGGATGGTCTCAATGGCGTTGAAGAGATAGGTT 1145704
Query 794574 CTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGAT 794633
| || || ||||||| ||||||||| ||||| || ||||||||||| ||||||||
Sbjct 1145705 CGCTGAGAA-GGCTCCTTGATGTAGGTGTCAATGAGCAGGGAGTAGGTCTCGGAGTGGAT 1145763
Query 794634 GTTTTCGATGGCGATCTGGAAGCCATAAAAGCA 794666
||| || || |||||||||||| || |||||
Sbjct 1145764 GTTCTCCATCATGATCTGGAAGCCGTAGAAGCA 1145796
Score = 129 bits (142), Expect = 9e-24
Identities = 186/259 (72%), Gaps = 5/259 (2%)
Strand=Plus/Plus
Query 793892 GACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAG 793951
||| || ||||| || || || || ||| |||||| |||||||||||||| | ||
Sbjct 1145152 GACACCAGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCCAG 1145211
Query 793952 CGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCG--CACCCG 794009
||||| |||||| | ||| |||||||| | | |||| ||||||| || |
Sbjct 1145212 GGAGATGTTCTCCATGAAGTCGAAGGGGTTGGCAGACTTGTAGACCTTCTCGTTGCCCAG 1145271
Query 794010 AGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTC 794069
|||||| || || |||||||||||||| || |||||||| ||||||| |||||||
Sbjct 1145272 GGCGACG--AGGAGACGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTTGGCGTTC 1145329
Query 794070 ATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCC 794129
||||||| ||| || ||| || | ||| | | ||||| | ||| || ||||||
Sbjct 1145330 ATGCCGAGGAGGGCGCAGGGGAGAGCCTCAGTCAGGAACTCCTGCTCAATGGTGACGGCA 1145389
Query 794130 TCGATGATGATCTGCCTGG 794148
|| ||||||| | |||||
Sbjct 1145390 TCAGTGATGATGT-CCTGG 1145407
>seq37
Length=4018383
Score = 125 bits (138), Expect = 1e-22
Identities = 93/109 (85%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706
||| | ||||||||||| ||||||||||| || ||| | || ||||||||||| ||||||
Sbjct 1987593 GCCTCTAACTACCTCGATATCAAGCCCCTTCTTGATGTTGGCTGCAAGACCGTCGCCAAC 1987534
Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCA 2035755
| |||||||||||||| |||||||| ||||| ||||| || |||||||
Sbjct 1987533 ATGATCAAGGGCAAGTCTCCCGAGGAGATCCGAAAGACATTCAACATCA 1987485
Score = 104 bits (114), Expect = 4e-16
Identities = 78/92 (85%), Gaps = 0/92 (0%)
Strand=Plus/Minus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
||||||||||||||||||||||||||| ||||| |||||| |||| || || ||| | |
Sbjct 9672 GTACTTGGTGACGGCCTTGGTACCCTCAGAGACAGCGTGCTTGGCAAGCTCACCGGGGAG 9613
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGG 1485562
||| ||||| || | |||||||||||| ||||
Sbjct 9612 GATAAGGCGGACAGAGGTCTGGATCTCTCGGG 9581
Score = 102 bits (112), Expect = 1e-15
Identities = 324/501 (65%), Gaps = 15/501 (3%)
Strand=Plus/Minus
Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599
||| ||||| || || || |||| ||| ||||| || ||||| || || ||||||||
Sbjct 714456 CTGATCGACGTATCGGGCAGTGTTGTTGAAGACACGAAGCATAGGGGTAACACCGTTGGA 714397
Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659
|||||||| || || | ||||| ||| | ||| || | |||| || | ||
Sbjct 714396 GGTACCGTTGGTACCGGCGATGTAGGAGCCAGTGGCACGGATTCGGTGCACGTTCAGACC 714337
Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719
|| || || ||| |||||| || | || || | || || || || || || |||||
Sbjct 714336 AATACCACCAGCCATCTTGGAAATCATGGCACAGGTCTTGAGAGTATCATAAATACCCTC 714277
Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779
|| ||| |||||||||| | || ||||| || ||| || || | | || ||
Sbjct 714276 AATACTGTCCTCCTTCATGTCGACAAGGAAGCATGAGGAGAGCTGAGGCTGGGGAGTACC 714217
Query 2073780 GGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATGGCCTCGTAGGT 2073839
||||||||||| ||||| | || ||| | ||| |||||| | ||| ||
Sbjct 714216 CGCATTGAAGAGGGTGGGGGAGGCATGGGTGAAGAACTTGCTCGACATGAGGTTGTAAGT 714157
Query 2073840 GGCGAGCACGCGCGCCAGCGCGTCTTGGACGTCGGCAAACCCATAGTGGCCGATGGCGAC 2073899
|||| || ||| | | | || ||| |||| || ||||| || ||
Sbjct 714156 CTCGAGGACACGCTCAA-----TGTT----GTC-----ACCC-CAGATGCCGACAGCAAC 714112
Query 2073900 GCGCATGATCATGTACTGGGGTCGCTCGACGACGGCGTCGCGCACCTTGGTCAGGTAGGA 2073959
||||||||||||| |||||| ||||| || | | | | |||| ||||||||
Sbjct 714111 ACGCATGATCATGTGCTGGGGGCGCTCAACAATCTTGCCATCAATCTTGAGGAGGTAGGA 714052
Query 2073960 CCGACGCAGGGTCGCCAGGCCAAAGTACGAGTAGGCCAGGTCGCGCTCGTGGCGGATGGC 2074019
|| || ||| | ||||||||| ||| | ||| || || | | |||||
Sbjct 714051 TCGCTCAAGAGTCTTGAAGCCAAAGTATTGGTATTGGAAGTCACGGTCATAGACAATGGC 713992
Query 2074020 GGCGTCGAGGGCCTCCTTGTG 2074040
|| ||| || ||||||||||
Sbjct 713991 GGAGTCTAGCTCCTCCTTGTG 713971
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916235443420217
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