Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04- 27] 103 sequences; 46,940,970 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq32 138 2e-27 >seq32 Length=3227256 Score = 138 bits (152), Expect = 2e-27 Identities = 161/216 (75%), Gaps = 1/216 (0%) Strand=Plus/Plus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || | |||||| || ||||| ||||| || || || ||||| || | | ||| Sbjct 1807413 ACGGAGCACAAGGTGCAGGGTCGATTCCTTCTGAATGTTGTAGTCAGAGAGGGTGCGACC 1807472 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 ||| || || || || ||||||||||| |||| || || || || || || || ||||| Sbjct 1807473 GTCCTCCAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTC-GGGGGGATACCCTCCTT 1807531 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 || |||||||| | || ||||| ||||| ||||| | | || || |||| ||| || Sbjct 1807532 GTCCTGAATCTTGGACTTCACATTATCAATGGTATCGCTGGACTCGACCTCCAGAGTGAT 1807591 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| ||||| | ||||| ||||| |||||||| Sbjct 1807592 GGTCTTTCCTGTGAGAGTCTTGACAAAGATCTGCAT 1807627 Score = 122 bits (134), Expect = 2e-22 Identities = 167/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | || ||| ||||| | |||||||||||| || ||||| || || || || Sbjct 1807627 TACCACCACGCAGACGAAGAACCAGGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGC 1807686 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 ||| ||| ||||| || ||||| || || || ||||| |||| ||||| || |||| Sbjct 1807687 TGAGAGTTCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATAAGTCGCTGTTGGTCAGGAG 1807746 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | |||||||||||||| |||||||| | || || || || || || || | ||| | Sbjct 1807747 GAATTCCTTCCTTATCCTGAATCTTCGACTTCACGTTATCGATTGTGTCGGACGATTCCA 1807806 Query 82762 CTTCCAA-AGTTATCG-TCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | || || || || | |||| || || | ||||| || || || ||||| Sbjct 1807807 CCTCGAAGGGTGATGGTTCTTTCCAGTGAGAGTCTTGACGAAGATTTGCAT 1807857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981825904294917