Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04- 27] 103 sequences; 46,940,970 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq37 257 2e-63 seq41 116 4e-21 seq32 116 4e-21 seq4 107 2e-18 >seq37 Length=4018383 Score = 257 bits (284), Expect = 2e-63 Identities = 995/1544 (64%), Gaps = 51/1544 (3%) Strand=Plus/Minus Query 148260 TTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGATACACGTTGCTCGTAAACGGT 148319 || || ||||| |||||||| ||||| || || ||| | || | |||| || | || Sbjct 715508 TTAACGACCTGGAACTCGCCAGCGAGGACACGACGCTGGTAGATGTTGGAGGTGTAAGGC 715449 Query 148320 TCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCATGTACGCTACC 148379 || || |||||||||| |||| ||||||| || | || ||||||||| || | | Sbjct 715448 TCGAAGCACTCGTTGTTACCCAGGATCTGCGAAGTGCTGGCAGTGGGCATGGGGGCAAGC 715389 Query 148380 AGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAGCCGCCCAGTCCCAG 148439 ||||| |||||| ||| | | || | | | | |||| | ||||||||||| Sbjct 715388 AGCAGACTGTTGCGGGTACCATGCTCCTTGACCTGCTCCCTGAGAGACTCCCAGTCCCAG 715329 Query 148440 AGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCGCGGCTAGCGGGGCTG 148499 || || || ||||||||||||||||| |||| ||||| || || || | Sbjct 715328 AGATCAGAGGGCTTCACGTTCCACATGTCGAACTGGAGAATACCCTCAGAGGCAGGAGAG 715269 Query 148500 CCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCA-GCTCGCCTCGAGCGC 148558 |||| | | | ||| || || | | || ||||| | ||| | || || || Sbjct 715268 CCCTTGAAGGTAGAGTAAGGACCCTCCTCCTTGGCCAGCT-GCACGGAAGCAGTCAGAGC 715210 Query 148559 GCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGC---AGCGCCGC-CGACTCGCTTT 148614 | | ||| || ||||| || ||| |||| ||| | ||| | || | | Sbjct 715209 AGCATGGTAGATGGTCTCAAAGATCTGCTTGTTCAGCTCTCGAGCCTCAGGAGAC----T 715154 Query 148615 CGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCCAATGG 148674 || | ||||| ||||| | || || |||||||| ||||| || || |||||||| | Sbjct 715153 CGAAAGGCATGCGCAGAGCAAGGAAAGCATCGGCAAGACCCTGGACACCGACGCCAATAG 715094 Query 148675 GCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGC-GGATAGTGGTTGCGGTCGATG 148733 | |||||| |||||| | ||| || || || | || |||||||| || ||| Sbjct 715093 GTCGGTGTCGCATGTTGCTGTTGCGAGC-TTCAGGAACGGGGTAGTGGTTCACATCAATG 715035 Query 148734 ATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGC------AATTCAAAA 148787 ||| ||| || ||||| || || || ||| | | ||||| || ||| | Sbjct 715034 ATCCTGTTCAGGTTGCGAACGACAGTCTGTGTGACCTCGTGCAGCTTCTGGAAGTCATAG 714975 Query 148788 TCGTACTTGTCATCTACGATGCATCGGTTCACGGCGATAGAGGCTAGATTGCACACGGCC 148847 | || ||||| |||| | | | ||||| |||||| || || || || || Sbjct 714974 CAGGCCTCGTCATAGTTGATGAAAGAGGGAAGGGCGAGAGAGGCAAGGTTACAGACAGCA 714915 Query 148848 GTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATT---GCTGCATTTGATC 148904 |||||| ||||| | |||||| | |||||| | |||||| || ||||| || | Sbjct 714914 ACCTCATCAGGGGCACAGTACTCGATGATCTCAGTGCACAGGTTGGAGCTGCGAATGGT- 714856 Query 148905 ACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGT 148964 |||| |||||| || |||||||||| |||||| |||||||| |||||| | || Sbjct 714855 --ACCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGG 714798 Query 148965 CCGCCAGTTTCCACCTGCGTTTCCACTATG--AACCGATGCAGGTCCTGCGCGCGCACTT 149022 ||||| || ||| | || | ||| | | | || | ||| || ||| Sbjct 714797 TTACCAGTCTCGGTCTGAGCCTCGAGGATGGCATACCA--GAGCTTCTGGGC-----CTT 714745 Query 149023 GCTGCTCGTAGCGACCCT------CCTGCTCGTA--TAAAGTATACAGCCGCTCGAACGC 149074 || || | |||||||| ||| ||| || | ||| | ||| ||||||| | Sbjct 714744 CATGGTC-TTGCGACCCTTGCCGGCCTTCTCATACTTCTCGTACAGAGC--CTCGAACTC 714688 Query 149075 CTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAGCGACCACACGCC 149134 ||| |||||||| ||| |||||||||| |||| || || ||||| || | ||| | || Sbjct 714687 CTCACCGTAGCAGTCGGCGAGACCGGGACACTCGTTGGGACACATCAGAGTCCAGTCACC 714628 Query 149135 GTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTACATGAGGTCGCG 149194 || | | || |||||||| || |||||||| | |||||| || | | |||||| Sbjct 714627 GTTCTTCTCGACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCCAGGAACAAGTCGCG 714568 Query 149195 CGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCACGCTGAATATGTCCGC 149254 || | ||||| ||| ||| |||||||| || | || | || || Sbjct 714567 AGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCTGC 714508 Query 149255 GTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGC---TTGCCGCCCTGGTCGAC 149311 |||||| ||||||| ||| | || | || || ||| ||||| ||||| ||||| Sbjct 714507 GTGCCAGGGCTCAAGGTAGATGGCAAAAGCACCAGGTCGCTTGTTGCCACCCTGATCGAC 714448 Query 149312 GTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCACTGGCAGTGCCGTT 149371 || || | ||||||| || || |||| |||||| || || ||| || ||||| Sbjct 714447 GTATCGGGCAGTGTTGTTGAAGACACGAAGCATAGGGGTAACACCGTTGGAGGTACCGTT 714388 Query 149372 AGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTTGACGCCGATGCCGCC 149431 ||| | ||| ||| || || | | ||||||||| | || || || || Sbjct 714387 GGTACCGGCGATGTAGGAGCCAGTGGCACGGATTCGGTGCACGTTCAGACCAATACCACC 714328 Query 149432 -GCCGTACTTTGAGATGGCCGCGCAGTCGCCGAGCGTCGAGTAGATGCCCTCGATGCTGT 149490 ||| | ||| || || || ||| ||| || || || ||||| || |||| Sbjct 714327 AGCCAT-CTTGGAAATCATGGCACAGGTCTTGAGAGTATCATAAATACCCTCAATACTGT 714269 Query 149491 CGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAACGCGTGCCGGCCGCGA 149550 | ||||||| | || ||||| ||| | | || || | || || || || Sbjct 714268 CCTCCTTCATGTCGACAAGGAAGCATGAGGAGAGCTGAGGCTGGGGAGTACCCGCATTGA 714209 Query 149551 ACATGGTGGGGCTGGCGTGTGT-AAAATATTTCTGGCTCATCATCTCGTACGACTCGAGC 149609 | | ||||||| ||| || || || | || || | ||| | | ||| | |||||| Sbjct 714208 AGAGGGTGGGGGAGGCATGGGTGAAGAACTTGCTCG-ACATGAGGTTGTAAGTCTCGAGG 714150 Query 149610 ACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCATCAGCATATGCTGCGGT 149669 || || || |||| || || |||||| | || || ||||| | ||| ||||| || Sbjct 714149 ACACGCTCAATGTTGTCACCCCAGATGCCGACAGCAACACGCATGATCATGTGCTGGGGG 714090 Query 149670 CGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCGTTTTCTAGTGTCTTGTAGCCA 149729 ||||| | | ||| |||| ||||| | |||| || || |||||| ||||| Sbjct 714089 CGCTCAACAATCTTGCCATCAATCTTGAGGAGGTAGGATCGCTCAAGAGTCTTGAAGCCA 714030 Query 149730 AAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGCGGCGTC 149773 ||||| | ||| | ||||| ||| | | | ||||||||| ||| Sbjct 714029 AAGTATTGGTATTGGAAGTCACGGTCATAGACAATGGCGGAGTC 713986 >seq41 Length=1307349 Score = 116 bits (128), Expect = 4e-21 Identities = 143/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGT 133527 ||| ||||| || ||||| |||| || ||| | | | |||||||||||||| || || Sbjct 954362 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA-TCCTCGAGCTGCTTACCAGCAA 954420 Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCT 133587 | || || |||||||||||||| || ||||| |||||||| |||||| ||||| | Sbjct 954421 AGATAAGTCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGT 954480 Query 133588 GCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTA 133647 || | ||||||| | |||||| || | ||||| || || || || || || || | Sbjct 954481 TGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTCCCCGTAAGGGTCTTGA 954540 Query 133648 CGAAAATCTGCAT 133660 |||| |||||||| Sbjct 954541 CGAAGATCTGCAT 954553 >seq32 Length=3227256 Score = 116 bits (128), Expect = 4e-21 Identities = 137/183 (75%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||||||||| ||||| || ||||||||| | ||| | | | ||||| |||| Sbjct 1808092 ATGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCA-TCCTCAAGCT 1808150 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 ||||||| ||| |||| || |||||||| || ||||||||||| |||||||| |||| Sbjct 1808151 GCTTGCCGGCGAAAATCAGGCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGAATCT 1808210 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||||| | || | || || | || ||| || |||| ||||| ||| ||||| | Sbjct 1808211 TCGACTTGACATTGTCGATGGTATCAGAGGACTCAACCTCGAGGGTGATGGTCTTGCCCG 1808270 Query 133636 TCA 133638 ||| Sbjct 1808271 TCA 1808273 Score = 95.1 bits (104), Expect = 1e-14 Identities = 106/139 (76%), Gaps = 2/139 (1%) Strand=Plus/Minus Query 116476 GGCTTCCACGTGCACGAGTTTGGCGACACCAGCAACGGCTGCACCTCCGCCGGCGAACAC 116535 ||||||||| | ||| ||||| |||| || ||||||||||||||| |||||| ||| Sbjct 1324099 GGCTTCCACATCCACACTTTTGGTGACAACACCAACGGCTGCACCTCTGCCGGCCCTCAC 1324040 Query 116536 TTCAACCC-CACCGGCCAGGACCACGGCGCGCCCAACGCCGCCGTTCGTCACGTCGGTGA 116594 |||||||| |||| | || |||||| || |||| || || | || ||||| || || Sbjct 1324039 TTCAACCCTCACCAG-AAGACCCACGGTGCTCCCACCGACGAGGCCCGCCACGTTGGCGA 1323981 Query 116595 CCTGGGCAACATTGAGGCC 116613 || |||||||| ||| || Sbjct 1323980 TCTCGGCAACATCGAGACC 1323962 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/199 (71%), Gaps = 3/199 (2%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| || || ||||| || ||||| || | ||| ||| |||||| |||||||| | Sbjct 1807431 GGTCGATTCCTTCTGAATGTTGTAGTCAGAGAGGGTGCGACC-GTCCTCCAGCTGCTTAC 1807489 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || || |||||||||||||| ||||| || |||||||| ||||| || Sbjct 1807490 CAGCAAAGATAAGTCGCTGCTGGTCGGG-GGGATACCCTCCTTGTCCTGAATCTTGGACT 1807548 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | |||| || ||| ||| ||| || || | |||| ||| || || || |||| Sbjct 1807549 TCACATTATCAATGGTATCGCTGGACTCGACCTCCAGAGTGATGGTCTTTCCTGTGAGAG 1807608 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || || || |||||||| Sbjct 1807609 TCTTGACAAAGATCTGCAT 1807627 >seq4 Length=1115785 Score = 107 bits (118), Expect = 2e-18 Identities = 112/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||| ||||||||||| ||| | || || |||||||| || || || ||||| |||||| Sbjct 972087 TCCTCAAGCTGCTTGCCAGCGAAGATCAGTCGCTGCTGATCCGGGGGAATGCCCTCCTTG 972146 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | |||| ||||| | || ||| || |||| ||||| | Sbjct 972147 TCCTGGATCTTGGACTTGACATTGTCAATGGTGTCCGAGGACTCGACCTCGAGGGTGATG 972206 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAA 133652 || ||||| ||||| || || |||||| Sbjct 972207 GTCTTGCCCGTCAGGGTCTTCACGAAA 972233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420177595720