Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04- 27] 103 sequences; 46,940,970 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq32 89.7 3e-13 >seq32 Length=3227256 Score = 89.7 bits (98), Expect = 3e-13 Identities = 138/193 (72%), Gaps = 3/193 (2%) Strand=Plus/Plus Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618 || || || |||||||| || ||||| ||||| |||| |||| || || || ||||| Sbjct 1807438 TCCTTCTGAATGTTGTAGTCAGAGAGGGTGCGACCGTCCTCCAGCTGCTTACCAGCAAAG 1807497 Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678 || | |||||||| || | || | ||| || ||||| ||| || |||| ||| Sbjct 1807498 ATAAGTCGCTGCTGGTCGGGGGG-ATACCCTCCTTGTCCTGAATCTTGGACTTCA-CATT 1807555 Query 33679 GTCAC-GGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737 ||| ||| ||||| || || || || | ||||| || || ||||| | || || || Sbjct 1807556 ATCAATGGTATCGCTGGACTCGACCTCCAGAGTGATGGTCTTTCCTGTGAGAGTCTTGAC 1807615 Query 33738 AAAGATCTGCATA 33750 ||||||||||||| Sbjct 1807616 AAAGATCTGCATA 1807628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703587373760