Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04-
27] 103 sequences; 46,940,970 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq32 82.4 7e-11
>seq32
Length=3227256
Score = 82.4 bits (90), Expect = 7e-11
Identities = 154/224 (69%), Gaps = 2/224 (1%)
Strand=Plus/Plus
Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961
||||| || | ||||| || | | ||||| || || |||||||||||||| | ||
Sbjct 1807634 ACGCAGACGAAGAACCAGGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTGAGAGT 1807693
Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021
|| || ||||| || || |||| |||| || |||||||| || ||||| || ||
Sbjct 1807694 TCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATAAGTCGCTGTTGGTCAGGAGGAATTCC 1807753
Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCG-A 132080
||| ||||| ||| || |||| | || | || |||| || ||||| ||| |
Sbjct 1807754 TTCCTTATCCTGAATCTTCGACTTCACGTTATCGATTGTGTCGGACGATTCCACCTCGAA 1807813
Query 132081 CCGTCAGCGTT-TTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| | ||| || ||||| ||||| || | ||| || |||||
Sbjct 1807814 GGGTGATGGTTCTTTCCAGTGAGAGTCTTGACGAAGATTTGCAT 1807857
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476610586363080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |