Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04- 27] 103 sequences; 46,940,970 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq32 82.4 7e-11 >seq32 Length=3227256 Score = 82.4 bits (90), Expect = 7e-11 Identities = 154/224 (69%), Gaps = 2/224 (1%) Strand=Plus/Plus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||||| || | ||||| || | | ||||| || || |||||||||||||| | || Sbjct 1807634 ACGCAGACGAAGAACCAGGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTGAGAGT 1807693 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 || || ||||| || || |||| |||| || |||||||| || ||||| || || Sbjct 1807694 TCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATAAGTCGCTGTTGGTCAGGAGGAATTCC 1807753 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCG-A 132080 ||| ||||| ||| || |||| | || | || |||| || ||||| ||| | Sbjct 1807754 TTCCTTATCCTGAATCTTCGACTTCACGTTATCGATTGTGTCGGACGATTCCACCTCGAA 1807813 Query 132081 CCGTCAGCGTT-TTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | ||| || ||||| ||||| || | ||| || ||||| Sbjct 1807814 GGGTGATGGTTCTTTCCAGTGAGAGTCTTGACGAAGATTTGCAT 1807857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476610586363080